Salvelinus namaycush (lake trout): 120046433 Help Entry 120046433         CDS       T07522                                  Name (RefSeq) cadherin-23-like   KO K06813   cadherin 23 Organism snh  Salvelinus namaycush (lake trout) Brite KEGG Orthology (KO) [BR:snh00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:snh03037]     120046433    04515 Cell adhesion molecules [BR:snh04515]     120046433 Cilium and associated proteins [BR:snh03037]  Primary cilia and associated proteins   USH complex and associated proteins    120046433 Cell adhesion molecules [BR:snh04515]  Cadherins   Major cadherins    120046433 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Sde0182_C Bact_surface_Ig-like Motif Other DBs NCBI-GeneID:  120046433 NCBI-ProteinID:  XP_038847590 UniProt:  A0A8U0QQR3 LinkDB All DBs Position Sna4:30354600..30923726 Genome browser AA seq 3368 aa AA seqDB search MLWSVGFGGRMTVAKILLSFFILNSFCEASNQPPRFQNYFFHSYLLIYENTPVGTSVTQL QAVDPDQEPLIFGVVGEEAMRYFAVERDTGVVWLRQPLDRETKSEMQVEFFVSDSQGVVK DTVNIQIGDVNDNSPTFHGQPYTVHIAENTPVGTSVYQVNATDPDQGTGGSVLFSFQPPS SFFSIDGARGTVTVTRALDYETTSAYQLTVNATDQDKKRPLSSLSNLAITITDVQDMDPI FTNLPYSTNIGEDVPPGYEVRKIRAIDQDLGRPRGIGYTIISGNTNSIFALAYISGSLTV NGQLDRENPLYSSGFTLTVKGTELNDDRTPTDASVMTTFTILLIDKNDNAPKFNSSEYRV RITELAQVGFALPLFIQAEDKDEGVNSMFQVFLSGNNSDHFTISPTAVQGRADIRMRVDV PLDYENIQRYSFSLYANESISEHVGFARIYIDLINENDNRPIFLKPLYNISLPENTPRGT SLLRIQATDGDFGTFGTVRYYFSDEPDQFSLDTETGWVHLWGNLDYELMRRFTLTVLARD GGGEETTGRLWVNVLDVNDNTPLFQKEAYMGSLRENEQAAQQVARIRATDEDSPPNNFLT YTITSVSAFRGYFRITMVEGYAVVSVNSPLDYEMVPEGMIYLTVMAKDGGNPALNSSVSV TVELFDENDNPPMFSKPSYLVKIPENIIAGATVVFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNAPM WRDEPYHANVVEMSPVDTDVVSVLAIDPDVGENGTVVYSISPENPFYTINSSTGKIRTSG AVLDRERSNPKDTQLMRTIIVSAVDLGRPPLRSSVSTTVYVNLLDLNDNDPIFLNLPFVA EVPEGLPSGSSVFKIQVEDPDQEENGMVTMGLRVGMPRVDFYLNTTTGVLYSTATLDREQ ISLYHLRIVAYDQGQNPRTSTSTLTITVLDVNDETPTFFPKVYNVSLQESVPRDHVVARL ICSDNDAGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVGLDRETQATYSLVIEAIDNGP AGSRRTGTATVFVEVLDVNDNRPIFLQNSYETSVLENVPIGSSILQVQATDSDQGENGRV LYMILSGNSKGLFRINELSGLVMRGQRALDRESSSSHVLEVEAYNSDQGRMRSSVRVIVY VEDANDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALDSGSDRKFD VDVSTGLVTTVDYLDYETKTSYLMNVSATDQAPPFHRGFCMVYVTLLNELDEAVAFFSAG YEVSLMENIATGTEVVQVKAQSADNLNQLSYRFDPDTSPAALALFKIDSITGRITVTGLL DREKGDLYTLTVVADDGGPKKDSTVVSINIQDENDNSPEFDITSDSLVEIPENTPIGKRV AVVLGRDKDAGKNGLVQFRLVAGNMQDVFEIRTVNHTYGEIYVNSPLDRESVDRYLLKVR AMDSGVPPRYRDLPLIINILDVNDNTPVIESQGGYNVSVSENVGGGTSVLRVVATDRDIG PNAMLFYYITSGNKDLTFRMDRMTGEMVTRPSPPDRERQQEYRLIMMVEDDGTPSLSSST TIYVRIVDENDNAPEFPEEEYVTVLSEGPNTVGAIIASVTAIDPDEGLNGTLRYAIIHGN LAITFHINHTTGRIVAVKELDFEISNGHYTLIVTATDQCPIHALRLTSSTTVLVNVLDVN DVTPTFTKPYEGPFEITEGQPGPRVWTLKAIDQDSGLNGKVEYSITAGDPQNEFVVSPVE GELRVRRDVELDRETTPFYNITVMAKDLGNPPRSSMVVVGVHVLDINDNDPMLLNLPHNT SVREGASIHTSVTTVQARDMDSGRNALLTYNITAGNHDGAFYINDTTGMVQVNRPLDRER VGEYRLTITVKDNPENPRIARRDSDMLVITVLDDNDNRPIFTQTSYRAEISENSPSGSAV SVLNGPVLAEDKDIGPNAVVRYRLLGTRLDLFTVDSDTGIVRVRQKALLDREAFVEPRVE LLLVGEDVGGLNSSVPLTVTIMDQNDNPPVFNPPSLTVHLPENSPTGVVVTQLSASDADS GSNAWLLYRLESGAQDRFVVDSLSGAVLVGNATLDREERGSYRLVVVATDRGTPSLSGTA TLSVILDDVNDSRPRFLEPVTTININESTPPGVVVATLAAKDPDLRPRLEYYIISVEAKD DGNNPVVGLQESFGIDFHTGAVFVRNPLNRELVATFEILVSVHDNASDVIDMSVSVPNAR LIVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHL PRGDYLRLEDPSTGKIIANRTVDFEQVQWLNFTVRAQDHGSPPRVAELPVYLRIVDVNDN NPIFKQPSYQKPVFEDVDLGTVIVRVSATDADSGLFSVIEYSLVDGEGKFGITPSTGDIY ILSPLDRETKDHFTLTAIARDNPGGSPNNRRENSVQVLVTVLDVNDFRPRFSERIFETSV FENEPSGTSVITLTATDLDEGQNGLLSYSMQGPGADAFSLDADTGLVRSLRLLQSFEHFN LTVVATDQGRPPLWGTATLHIIIIDVNDNRPMFVRPTNGTIMHIMEEQPPGLLVYEVFAT DGDEGVNGEVRYAFLQTGAGNRDWDNFHIDAITGVITTAIKLDREKQALHSLIVVAYDLG QPVPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVLEHSTPGTVVGNVTGAVDAD EGSNAVVYFFIAGGDTEGNFGLSPGGVLKVKKDLDRENISVYSIIVKASSHRNWAPARGQ RSAWGRALDPSRDPTLEEVRIYLEDINDQPPRFTKLEYTTGVAADAKVGSDLIRVQAIDN DVGNNSLVLYHVLSIRYIKLQSNDTEDIGNGFIIGETDGIIRTFDLFTAYDPGYFVVEVL ARDLAGHSDIAMVGIYILRDDQRVKIVINEIPERVRQFQEEFINLLSNITGAIVNTDDVQ FHVDKKGRVNFAQTDVLIHVVNKHTNRILDVEKVIQMIDENKEQLKKLFRNYNILDVQPA VSGRAPDDLTTLQMAIIILAVLLFLAAMSFIFMNWYYRTVHKRKLKAIVAGSTGKQDLMD ILDLPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSEVTDLWNSPAPTHGTF GRKPQAKPEDDRYLRAAIQEYDNIAKLGQIMREGPVKGTLLNVVLDDYLRLKKLFAARLV TKSTSQGDQSSVTELIQSDLDDDEDERVGMGDSWGTLRFKHKLPVEMRGPDGVHVVHGSM GTLLTSDLNSLPEDNQLALAHSMEALNATDSGLYAERNARTESAKSTPLHHNKNDDTLSE SPLEITEL NT seq 10107 nt NT seq  +upstreamnt  +downstreamnt atgttgtggagtgtgggtttcggtggcaggatgacggtggccaagattctcctatccttc ttcatcctaaactccttttgcgaagcctccaaccagcctccacgcttccagaactacttt ttccactcctatcttctcatctacgagaacacaccagtcggcacatcagtgacccagctg caggcggtggacccagaccaggagcccctcattttcggggtagtgggagaggaggccatg aggtactttgcagtggagagagacactggagtagtgtggctacgacagcccctggaccgc gagaccaagtcggagatgcaggtggagttctttgtgagtgacagccaaggggtggtcaaa gacacagtgaatattcagataggagatgtgaatgacaactcccctactttccatggccag ccgtacacagtacacattgcagagaacactccagtgggcacctcagtgtaccaggtgaat gccacagacccagaccaaggcacggggggcagtgtgctcttctctttccagcccccctct tcctttttctccatcgatggagcccgtggtacagtcactgtcaccagggctctggactat gagaccacatcggcctaccagctcactgtcaatgccacggaccaggataagaagcgccct ctgtccagtctatctaatttagccatcaccatcactgatgttcaggacatggaccccatc tttaccaacctaccctacagcaccaacataggggaggatgtcccaccgggctatgaggtg cgcaagataagagccattgaccaggatctggggagaccgagaggcatcggctacaccatc atctcaggcaacaccaacagcatctttgctctggcctacatcagtggctctttgacggtg aatggacagctggacagagagaaccccctctactcatccggattcactctaaccgtcaag ggcacagagttgaatgatgaccgtaccccgacggatgcctcggtgatgaccacattcacc atcctgctgattgacaagaacgacaacgcgcccaagttcaacagctccgagtaccgagtg cgtatcactgagctggcccaggtgggtttcgccctacccctcttcatccaggctgaggac aaggatgagggagtgaacagtatgtttcaggtgttcctatcggggaataactcggatcac ttcaccatctcacccacagcggtgcagggccgtgctgacatcaggatgagggtggacgtg cctctggactacgagaacatccaaagatacagcttctctctatatgccaatgagtccatt tcagaacatgtgggttttgcccgtatctacattgacctgatcaatgagaatgacaaccgg cccatcttccttaaacccctgtataacatcagtctgcctgagaacacacccagaggaacc tctctgctacgcatccaggctacagacggtgactttggcacgtttgggacagtgcggtat tacttcagtgatgagcctgaccagttttcattggacactgagacaggctgggtgcatctg tggggcaatctggactatgagctgatgcgtcgattcactctgaccgtgctggcccgggac gggggtggggaggagaccacgggcaggctgtgggtcaatgttctggatgtcaatgacaac acaccccttttccagaaggaggcctacatgggctcactgagagagaacgaacaggccgca caacaggtggcccgaatcagggcgacagatgaggactctccccctaacaacttcctgacc tacaccatcacctcagtgtctgcgttccgtggttacttcagaatcaccatggtggagggc tacgcagtggtcagtgtgaacagccctctggactacgagatggtccctgaaggaatgatc tacctgactgtgatggctaaagacggcgggaacccagcccttaacagcagtgtctctgtc accgtcgagctgtttgatgagaatgacaacccgccaatgttcagcaagccatcctacctc gtcaagatccctgagaacatcattgcaggggcgacggttgtgtttgtgaatgccactgat ctggacgcctcccgggagtttggacaggcctcactcatctactccctacagggctcctcc cagttccgcctcaacacgcgctcaggagagatcaccactacagccttactggacagagaa ctgaagtcagagtacatcctgattgtcagagctgtggatggaggggtggggccactgcaa aagactggcattgccacggtgaacatcaccatcctggacatcaatgacaatgcccccatg tggcgagacgagccctaccacgccaatgtggtggaaatgagccccgtcgacactgacgtc gtgtctgtgctagcgatagacccagatgttggggaaaatgggacagtggtgtacagcatc agcccagagaaccccttctacaccatcaacagcagcacgggcaagatcaggaccagcggg gccgtgctggacagagagaggtccaacccaaaagacacccagctcatgaggaccatcatc gtgtctgctgtcgatcttggcagacctccactgcgttcctcagtcagcaccacggtgtac gtcaacttgctggaccttaatgacaatgaccccatcttccttaacctgccctttgtggcc gaggtgccagagggcctgcctagtggatcctctgtgttcaagatccaggtggaggaccct gatcaggaggagaatggtatggttaccatggggctacgggtgggcatgccacgagttgat ttctatctcaacaccaccacgggcgtgctgtactcaacggcaactctggaccgcgagcag attagcctgtaccacctgaggatcgtggcgtacgaccaagggcagaacccacgcacctcc accagcacccttaccatcacagtcctagatgtcaacgacgagacccccacattcttcccc aaggtgtacaacgtgtccctgcaggagagcgtccccagggaccatgtggtggctcgcctc atctgctccgacaatgacgccggccttaacgccgagctcagctacttcatcacaggtggt aaccaggatggtaaattcagtgttggcttcagagatggtgtggttcggactgtggttggc ttggacagagagacacaggctacatactcactggtcatagaggctatcgacaatggtcca gcaggcagcaggaggacaggcacagccacagtgtttgtagaagtactggacgtgaacgac aacagacccatcttcctccagaacagctacgagaccagcgtactggagaatgtccccata ggatccagcatcctgcaggtgcaggccacagattcagaccagggggagaacggcagggtt ctgtacatgatcctctctggcaacagtaagggtctgttcagaattaatgagctgtcgggg cttgtgatgcggggccagagggctctggacagagagagcagcagctcccacgtgctggag gtagaggcctacaacagtgaccagggcaggatgaggagctccgtacgggtgatagtgtat gtggaggatgccaatgacgaggcaccagtgtttacccagcagcagtacaaccgcctgggt ctgagggagaccgctggcattggcacctctgtcatcgtagtacgagctacagaccccgac actggtgacggtggggcggtggcctatgccctggactcaggctccgaccgtaagtttgat gtggacgtgagcacgggcctggtgaccactgtagactacctagactacgagaccaagacc agctacctgatgaacgtgtcggctaccgaccaggcgccgccgttccaccgtggcttctgc atggtctacgtgaccttacttaatgagctggacgaggcggtggcgttcttctctgcgggc tacgaggtgtcactcatggagaacatcgccacaggaacggaggtggtgcaggtaaaggca cagtcggcggacaacctcaaccagctgtcgtatcgctttgacccggacacatcgccagcc gccctcgccctcttcaagatcgacagtatcacgggccgtatcacagtcacagggctgctg gacagggagaagggggacctctacaccctgactgtagtggctgacgatgggggacccaaa aaagactccactgtggtgtcaatcaacatacaggatgagaatgacaacagtccagagttt gatatcacatctgattcattggtggagattccagagaacacacccatcgggaagagagtg gctgtggtgcttgggcgcgacaaagatgccgggaaaaatggactggtgcaattcaggctg gtggcagggaacatgcaggatgtgtttgagatccggacagtgaaccacacctatggagag atctacgtcaactcccctctggaccgagagtctgttgaccgctacctgctcaaggtgcgt gccatggacagtggcgtgcctccccgctacagagacctccctctaatcatcaacatcctg gacgtcaatgataacacacccgtcatcgagagccaggggggctacaatgtcagcgtcagc gagaatgtgggaggcggtacgtccgtcctgcgcgtggtggccacagaccgggacatcggg cccaacgccatgctcttctactacatcacctcgggtaacaaggacctcaccttccggatg gaccgcatgaccggcgagatggtgacccgaccatccccacctgaccgcgagcgccagcag gagtaccggctgatcatgatggtggaggacgacggcacgccatcactatcgtcatcgact accatctacgtgcgtatagtggatgagaacgacaacgcgccagagtttccagaggaagag tatgtgacggtgctgagcgagggccccaacaccgtgggtgccattattgccagcgtaacc gccatcgacccagacgagggcctcaatggcaccctgcgatatgccatcatccacggaaac ctggccatcaccttccacatcaatcacactaccggaaggattgttgcagtgaaggagctg gactttgagatcagcaatggacactacacacttatcgtcacagcaacggaccagtgtccc atccatgccctccgcctgacttccagcaccacggtgttggtgaatgtcctggatgtgaac gatgtgacccccaccttcaccaagccctatgaggggccctttgagataacagagggccag ccggggccccgggtctggaccctcaaggccatcgaccaggactctggactcaacggcaaa gtggagtacagcatcactgccggagacccccagaatgagtttgtggtttctccagtggag ggagagctgcgtgtgaggagagatgtggagctggacagagagaccacacccttctacaac atcactgtcatggccaaagacctgggtaacccaccacgcagcagcatggtggtggtgggt gtccatgtgctggacatcaatgacaacgaccccatgctgttgaacctgccccacaacacc agtgtgagagagggggcgtccatccacacctcggtgacaacggtccaagcacgggatatg gacagtggacgcaacgccctgctcacctacaacatcactgccggaaaccacgatggagct ttctacatcaatgacactacagggatggtgcaggtgaacaggcctctggacagagaaagg gtgggggagtacagactgaccatcaccgttaaagacaaccctgagaatccccgcatcgct cgccgggactcagacatgctggtgatcacagttctggatgataatgacaacaggcccata ttcacacagaccagctaccgggctgagatctctgagaactccccctcaggcagtgctgtg tcagtgttgaatggaccagtgttggctgaggacaaagacattgggcccaacgctgtggtc aggtaccgtctgctgggaacaagactggacctcttcactgtggactctgatacaggtata gtgcgtgtgcgacagaaggctctgttggaccgcgaggcgtttgtggagccgcgggtggag ctgctcctggtgggggaggatgtgggagggctcaacagcagcgtgcccctcactgtgaca atcatggaccagaacgacaaccctcctgtctttaacccccccagcctcactgtgcacctc cctgagaacagccccactggtgtggtggtgacccagctgtctgccagtgacgctgattca ggctctaatgcctggctgctttaccggctggagagcggtgcccaggaccgcttcgtagtt gactccctctctggtgccgtcctggtgggcaacgccaccctcgaccgtgaggagcgtggc tcctaccgcctggttgtcgtggctactgaccgtggcacaccctcattgtcgggcacggcc accctgtcggtcatcctggatgacgtcaacgactcgcgaccacgtttcctggaacccgtg acaactattaacataaacgagtctacaccgccgggcgtggtggtggcaacgcttgctgcg aaggaccctgacctacgaccccggctggaatattacataatctctgtggaggcgaaggat gatggaaataaccctgttgttgggctgcaagagtcattcggcatcgatttccacacgggt gctgtgtttgtgcgtaacccactcaacagagagctggtggccacctttgagatccttgtg tcggtgcatgacaacgccagtgatgtcatcgacatgtcagtcagcgtacctaatgcgaga ctgatagtgaacgtgctggatgtgaatgacaacgccccgcggttcagaccctttggagtg gccaacttctcagagaagattctggaaggcgctcagccaggcaccactctgctgtccgtg tcagctgtggacccagacaaaggccctaacggacaggtcatctaccagctgctacacctg cccagaggggactacctcagactggaggacccctcaactggcaagatcatagccaaccgg acggtggactttgagcaggtgcagtggctgaacttcacagtgagagcccaggaccacggc agtccacctagagtggctgagcttcctgtctacctgcgtatagtcgatgtcaatgataac aaccctatctttaaacaaccctcttaccagaagccagtgtttgaggatgttgacttgggc acggtcatagtgagagtcagtgccacagacgcagactctggcctcttctctgtcatcgag tacagcctagtagatggagagggcaagtttggcatcactccatccaccggtgacatctac attctgtctccactggacagagagactaaagaccacttcaccctgacagccatcgctagg gacaaccctggcggcagccccaacaaccgacgagagaactctgttcaggtcttggtgacc gttctggatgtgaatgacttccgtccgcgtttctcagagcggatctttgagaccagtgtg tttgagaacgagcccagtgggacgtctgtgatcacgctgactgccactgacttggacgag gggcagaacggcctgctctcttacagcatgcagggcccgggggcagatgccttctctctg gacgctgacacaggtctggtgcgttctctccgtctgctgcagtcctttgagcactttaac ttgacggtggtggctacagaccagggcagaccacccctctggggcaccgcaaccttacac atcatcatcatagacgtcaacgacaacaggcccatgttcgtcaggcccaccaacggcacc attatgcacatcatggaggagcagcccccaggcctgctggtgtatgaggtgtttgcgaca gatggggatgaaggggtgaatggagaggtgcgctatgccttcctccagacaggagctggg aacagagactgggataacttccacattgatgctattacaggagtcatcaccaccgccatc aaactggaccgagagaagcaggccctgcacagtctgattgttgtggcctatgacctgggt cagcccgtgccttatgagaccacccagcccttacaggttgcgctgttggacattgatgac aacgagcctgtcttctttaagcccccgcgaggcagcctgccgtaccagactctgtctgtg ttagagcactctactccagggacagtagtgggtaacgtgacaggagctgtggacgcagat gaaggctccaatgctgtagtctacttcttcatagcagggggagatactgaaggtaacttt ggcctgagcccagggggcgtactgaaggtgaagaaggatctggaccgtgagaacatctca gtgtactccatcatcgtcaaggcctccagccacaggaactgggcccctgctaggggtcaa aggtcagcctggggaagagcacttgaccccagccgtgacccaaccctggaggaggtcaga atctacctggaggacatcaacgaccagccaccacgcttcaccaagctagagtacactaca ggtgtggctgctgatgccaaggtaggctcagatctgattcgggtacaggccatagacaac gatgtagggaacaacagcctggtgctgtaccatgtcctgtccatccgctacattaaactc cagtccaatgacactgaggacataggaaacggcttcatcataggagagacagatgggatc atccgtacctttgacctgttcacggcttacgacccgggctacttcgtggtggaggtgttg gcacgggacctggcgggccacagtgacattgccatggtgggcatctacattctgcgggac gaccagcgggtgaagatcgtcatcaacgagataccagagcgggtacgacagttccaggag gagtttatcaacctgctgtccaacatcaccggagccatagtcaacacggacgatgtgcag ttccacgtggacaagaagggcagagtgaactttgcccagacagatgtgctcatacacgtg gtcaacaagcacaccaaccgcatcctggatgtggaaaaggtgattcagatgattgatgag aacaaggaacagctgaagaaactgttcaggaattacaacatcctggatgtccagcctgcc gtcagcgggagagcacctgatgacctcactacgctacagatggccatcattatcttagct gtgttgctcttcttggcagccatgtcattcatcttcatgaactggtactatcgcacagta cacaagaggaagctcaaagccattgtagcaggatccacagggaagcaagatctcatggac atcctggatttgcccaacaccaataaatactcatttgagggggccaaccctgtgtggcta gacccgttctgtcggaacctggagctagctgcccaggcagagcatgaagacgacctgccg gaaaacctcagtgaggtcactgacctgtggaacagccctgctcctactcacggaacattt ggccgcaaacctcaggcaaagcctgaggatgaccgttacctgagagcagccatccaggag tatgacaacatcgccaagctgggccagatcatgagggaggggcccgttaagggcacattg ctcaatgtggttctggacgactacctgaggctcaaaaagctctttgcagccagactggtc accaagtcgaccagccaaggcgaccaatcgtcagtcacagagctgatccagagtgacctg gatgatgacgaggatgagcgagtgggcatgggtgacagctggggaacgctgcgcttcaaa cacaagctccccgtggagatgaggggacccgacggcgtgcacgttgttcacggcagcatg ggcacgctcctgacctctgacctcaacagtctgcctgaggacaaccagctggccctggcg cactccatggaggcgcttaacgccaccgacagtgggctgtacgccgagcgcaatgcccgt accgagtcggccaagtccacgccgctgcaccacaacaagaacgatgacacactgtccgag agcccgctggagatcaccgagttatga

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