Sphingomonas sp. NIC1: A7E77_15040
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Entry
A7E77_15040 CDS
T04479
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03030
DNA replication
snj03430
Mismatch repair
snj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7E77_15040
03430 Mismatch repair
A7E77_15040
03440 Homologous recombination
A7E77_15040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snj03032
]
A7E77_15040
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_15040
Enzymes [BR:
snj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7E77_15040
DNA replication proteins [BR:
snj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7E77_15040
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7E77_15040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_5
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ANC88089
LinkDB
All DBs
Position
3214028..3215002
Genome browser
AA seq
324 aa
AA seq
DB search
MTALFGNAEAQGAFAAALRSGALHHAWLLVGPQGVGKARFAELAALRMLAEASASGVTAP
GLTVPADHPTRALVEAGSHPDLRILRRLPKDADKPDQDIARSISIAQVRSLQPMFATTPS
MGARRVVIIDAADDLERNGANALLKNLEEPPVGTVFLLVSHAPGRLLPTIRSRCRVLRFG
ALDEADMRRALHDALPDADSDEIGTLIAAGEGSPGRAIRYAGLDVAGLDTAIAAIATDGD
PVNTRRAALAKALAGKGNAARYEVFLDRVPAIIAREARGRAGARLKTALDAQAAARDLAG
AAMGLSLDAQATVFEMAAIVARLR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgttgttcggtaatgccgaggcgcagggggccttcgcggccgccctgcgcagc
ggtgcgctgcatcacgcctggttgctggtcgggccgcaaggcgtgggcaaggcacgcttc
gccgaattggcggcgttgcgcatgctggccgaggcgagtgcgagcggggtaaccgcgccg
ggactgacggtgcccgccgatcatcccacgcgcgctctggtggaggccgggtcgcatccc
gacctgcgtatcctgcgccgtctgccaaaggatgccgacaagcccgatcaggatatcgcg
cggtcgatcagcatcgcgcaggtgcgcagcctgcaaccgatgtttgcgacgacgccgtcg
atgggcgcacgccgcgtcgtcattatcgacgcggccgatgatctcgagcgcaacggagcc
aatgcgctgctcaagaacctggaggagccgccagtgggaacggtgttcctgctggtgagc
cacgctcccggacgattgctccccaccatccgatcgcgatgccgggttctgcgcttcggc
gcgcttgacgaagccgacatgcgccgtgcgttgcacgacgcgttgcccgatgccgatagc
gacgagatcgggacgttgatcgcggcgggggagggctcgccggggcgcgcgatccgttat
gcggggctggatgttgcaggcctcgacaccgcgatcgcggcgatcgccaccgacggcgat
ccggtgaacacgcgtcgggcggcgcttgccaaggcgctggcggggaaggggaatgccgcg
cgctacgaagtgttcctcgatcgggttccggcaattatcgcgcgcgaagcccgtggacgg
gcgggagcgcggctgaaaaccgcgctcgacgctcaggctgctgcgcgcgaccttgctggg
gcggcgatgggcctgtcgctcgatgctcaggcgacggtgttcgagatggcggcgatcgtc
gcacggctgcgctga
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