Sphingomonas nostoxanthinifaciens: K8P63_11135
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Entry
K8P63_11135 CDS
T08862
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
K8P63_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_11135
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
K8P63_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UAK22986
LinkDB
All DBs
Position
2355258..2356178
Genome browser
AA seq
306 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYSATRAGASIAFNQIHEPSGKRIKYEKVAPGIGPVDPE
EIVKGFQYEKGKYVLLNDEEIEGVKLESKKTLELTQFVDQSEIDAIYYDKPYYVVPADDL
AEEAFIVLHEALRRQKKIGLGQLALRGREYVVSLKPCGRGMVLETLRYSDEVNKAVSYFR
DIPDTKPEEDLLDLATTLIEKKSAKFDASDYHDRYVDALKELIERKRKGKTIEADEEPAA
QSRGSNVVDLMAALKRSLEKGGKAAANDGDDEPAPTKTRAAKPAAAKKAAAKPAARKPAA
RKRAAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcgcctactggcaggggcagatcaggctggccttggtctccattccggtc
gagatctactcggccacgcgcgccggcgcgtcgatcgcgttcaaccagatccacgaaccg
tcgggcaagcgcatcaaatatgagaaggtcgcgcccggcatcggcccggtcgatcccgag
gagatcgtgaagggtttccaatatgagaagggcaaatatgtcctcctcaacgacgaggag
atcgagggggtcaagctggagagcaagaagacgctcgaactgacccagttcgtcgatcag
agcgagatcgacgccatctattacgacaagccttattatgtcgtgcccgccgacgatctg
gccgaggaggccttcatcgtactgcacgaggcgctgcgccggcagaagaagatcgggctc
ggccagctcgcgctgcgcggccgcgaatatgtcgtcagcctcaagccgtgcgggcgcggc
atggtactggagacgctgcgctattcggatgaagtcaacaaggcggtcagctacttccgc
gacattcccgacaccaagcctgaagaggatctgctcgatctggcgacgaccctgatcgag
aagaagagcgccaagttcgacgcgtcggactatcacgaccgctatgtcgacgcgctcaag
gagctgatcgagcgcaagcgcaagggcaagacgatcgaggccgacgaggagcccgcggcg
cagtcgcgcggctcgaacgtggtcgacctgatggcggcgctcaagcgcagcctcgagaag
ggcgggaaggcggcggcgaatgatggcgacgacgagcccgcgccgacgaagacgcgtgcg
gccaagccggccgctgccaagaaggcagcggcgaagcccgccgcacgcaagccggctgcg
cgcaaacgagcggcgggatga
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integrated database retrieval system
