Streptomyces nodosus: CP978_17360
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Entry
CP978_17360 CDS
T06839
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
snq
Streptomyces nodosus
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snq03021
]
CP978_17360 (sigM)
Transcription machinery [BR:
snq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP978_17360 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
HTH_17
Rnk_N
Motif
Other DBs
NCBI-ProteinID:
QEV40078
UniProt:
A0A0B5DJZ2
LinkDB
All DBs
Position
3845172..3845894
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AA seq
240 aa
AA seq
DB search
MADGAVYGDSSDQDLLALHVEGDPDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDAL
VSAYRAAHTFRGRSAVTTWLHRITVNACLDRARKAASRRTSPVDDTERLEQLLEPYESAS
APAERNDLHRELLEALATLPADQRAALVLVDMQGYPVAEAARILRVPPGTVKSRCARGRA
RLLPLLTHLRTASGGKDDRDGKNTARGRNRTQGATVPPAAGPRDAGPSDSAAVKGGGGRA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggtgccgtgtacggcgactcgagcgatcaggacctcctcgcccttcatgtc
gagggcgaccccgacgccttcggtgagcttgtgcggcgccaccgggaccggctctgggcg
gtggcgctgcggacgctgggggaccgcgaggaggcagcggacgccgtccaggacgccctt
gtctccgcctaccgggccgcccacacctttcgcggccggtcggccgtcacaacctggctg
caccggatcacggtgaacgcctgtctggaccgcgcccgtaaggcggcgtccagaaggacc
tcacccgtcgacgacacggaacggctggagcagctcctggagccgtatgaatcggcgtcc
gctccggccgagcgcaacgatctgcaccgcgaactcctggaagccctggccaccctgccg
gccgaccagcgggccgccctcgtcctggtggacatgcagggctaccccgtggccgaggcc
gcccgcatcctccgtgtgccgcccgggacggtgaagagccgctgtgcccgcggcagagca
agactgctgccgctgctcacccatctgcgcacagcgagcggcggcaaagacgacagggac
ggcaagaacacagcccgcggacggaaccggacgcagggggcaaccgtcccacccgcagca
ggaccacgggatgcaggaccaagcgattcagctgctgtgaagggcggaggtgggcgagcg
tga
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