Solenopsis invicta (red fire ant): 105193467
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Entry
105193467 CDS
T03916
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105193467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105193467
03036 Chromosome and associated proteins [BR:
soc03036
]
105193467
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105193467
Coactivators
SAGA/TFTC/STAGA complex
105193467
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105193467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
SAGA-Tad1
TAF
Motif
Other DBs
NCBI-GeneID:
105193467
NCBI-ProteinID:
XP_025991684
LinkDB
All DBs
Position
9:complement(14191559..14201374)
Genome browser
AA seq
975 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSTPTVAGHQVSSASVSQQNHQVNSAIS
NGGTITAVQPQKHGVSNGGSATTVNSLMTQEATKSITTSTLLPVNVVTSNTVAPQVITTQ
HQQPPPQPQQQQQQHAQPPGISPATYINQVTTNQVSSNQTTHIPSLTKTHEPVKLIYPTV
GQVIATTGVANANNKLSFPAQTVGQLANGTLGITSQAVLQTTSNVVTNVCSVSQAASQTV
TTVNKPTGAALVIKTSATPGMVSVPMSVPVSVAGNAVSTALQAKAGVTSTIVPSNVQILN
VNAIRPATPVAGQQANKQVTPRVMIGQHQLVGARAGGPGITLQTIHSLQAGAQGHLLLKT
ENGQYQLLRVGPAPTAAPTGTAVTPNSITGNTVVAAPSPGTTYRLTSVPTVSRLNTQFTG
PPLALRKSVQTVAPTITTSTTTPGTVTTAPSTTSAPTATTVQTAQTATSRQTTDNTKEKC
RKFLANLLELSSREPKAVERNVRTLIQELIDTRVEPEEFCDRLEKLLNASPQPCLIGFLK
KSLPLLRQSLVTKELVIEGIKPPPANVVFSIASAVVPTQTQYRPTVAVAATVPVTAVTAT
ATTQVRVMTPLPTAVTTAAAVITTTVPRPAQSIPQRLVRPVTTVVRSPSAAYAVKSTVAA
TGIRPTAPVVQKPPIVATTVVKPITTTQGKTLNTTTTVNKAVVPSLVQKPAAKEKEKKTF
SSAGYTADDDINDVAAMGGVNLAEESQRILGSTEFVGTQIRSCKDEVFLHMTPLQQRIKQ
IASSHGLEEPNQEVAALISHAVQERLKNLVEKLAVITEHRIDLIKVDPRYEVTQDVRGQL
KFLEDLDRLERRKHEEQERELLLRAAKSRAKTEDPEQAKLKAKAKEMQRIEMEELRKKEA
NLTALQAIGPRKKPKLDTAESTNGTPGTNTSVSGLNRQMPMRPRLKRVNFRDLVFLLEQE
KETCRSTTLYKSYLK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctggaggaagctcttagcacggatgttgacgaatccgcagtg
aacgcgatagtgggctcccttgagacgcagcttgtgacgtccacaccgactgtcgccggt
catcaagtgagttccgcatcggtcagccagcagaatcaccaggtgaacagcgctatttcc
aacgggggcaccatcaccgcggtgcagccacagaaacatggggtttcgaacggcggcagt
gccactaccgtgaatagtctaatgactcaggaggccaccaagtcgatcactaccagcact
ctgctgcccgtgaacgtggttacctccaatacagtggcgccacaggtcatcaccacgcag
caccagcagccgccgccacagccacagcagcagcagcagcaacatgcacagccgcctgga
atatctcctgctacctatatcaatcaagtaacgactaatcaggtgtccagcaatcagact
actcatataccaagcttgaccaagacgcacgaaccagtgaagctcatctaccccacggtc
gggcaagttatagccaccacgggggtagcaaatgcaaataataagctctcctttcccgct
caaactgtcgggcagttagcgaatggtactttaggtataacgtcacaggcagtgctgcag
actacatcgaacgttgttaccaatgtctgctctgtcagtcaggcagccagccaaacagtg
accacagtgaataagccgacgggggcagctttagtgatcaagactagtgcaacacctgga
atggtttcagttccaatgtctgttccagtctcggtggctggcaatgcagttagcacagca
ttgcaggccaaagctggggttacttcaacaatagtacccagtaatgttcaaatcctaaat
gtaaatgcgatacgtcctgctacgccagtagccggacagcaagctaataagcaagttaca
ccgagagtaatgattgggcaacaccaattagttggagcaagagctggaggtccagggata
acgttacagacaattcacagccttcaagctggtgctcaaggtcatctgttattaaaaaca
gaaaatgggcagtatcagttattgagggtgggtccagctccaactgctgctcccactggt
actgcagttacaccgaatagtataactggcaacacagtagttgctgcaccatctccgggc
actacctatcgcctaacttcagtgccaactgtaagtaggctgaatactcagttcactggc
ccaccactcgccctaagaaaatctgttcagactgttgctcctactattactacatctact
acaaccccaggaacagtaactactgctccctcaactacttccgcaccaacggctaccact
gttcaaacagcacaaacagctacatcgcgtcaaactaccgataataccaaagaaaagtgc
cgtaaattcttagcaaacttattagagttatctagtcgagagcctaaagcagtggaacgt
aatgtccgaactttgatacaagaattgattgatactagagtcgaaccagaagaattctgc
gacagacttgaaaaattattaaacgcttcaccacaaccatgtctcattggttttctaaag
aaaagcttacctcttttacggcaatcgcttgttacgaaggaattagtcatagaaggaata
aaacctcctccagccaacgttgttttttctattgcatctgctgttgttccaacgcaaact
caatatagacctacagtagcagtggcagcaaccgttcctgtaacagcagttactgcaaca
gcaacaacacaagtgagagtaatgactccgcttccaacagcagtaacgacagcagcagca
gtaattacaacaacagttccacgacctgctcaatctattccacagagactggttcgacca
gtaacgacggtggttcggagcccttcagcagcatatgctgtgaaatcaacagtagcagca
actggaattcgtcctactgcccctgttgtgcaaaaaccacctatagtcgcaactacggtt
gtaaaaccaattactactacgcaaggcaaaacactcaatacaaccactactgttaataaa
gccgtagtgccttctcttgttcaaaaaccagctgctaaggagaaagagaaaaaaacattt
tcatcagcaggatatacggcggatgatgatataaatgatgtagcagctatgggtggtgtt
aatcttgcagaggaatctcaaagaatactcggttccacagaatttgttggtacccaaata
cggtcctgtaaagatgaagtatttttgcacatgacaccattacaacaaagaattaaacaa
attgcatccagtcacggactggaagaacctaatcaggaagtagcagcgttaatttcgcac
gctgttcaagaaaggttaaagaatttagtagaaaagttagcagtcattacagaacatagg
atagatctcataaaggttgatcctagatatgaagtaacccaagatgtaagagggcaattg
aaatttttggaagatctagatagactcgaacgtcggaaacatgaggaacaagaacgagaa
ttacttttacgtgctgccaagagtcgtgcaaaaacagaagatcccgagcaagcaaaatta
aaagctaaggccaaagagatgcaacgtatagagatggaagagttaaggaagaaggaagca
aatttaacagctttacaagcaattggccctcgtaagaagcctaaactcgatacagcagaa
tcgaccaatggtactcccggtacgaatacatcagtgagcggattaaataggcaaatgcca
atgagaccacgtttgaagagagtgaacttcagagatttggtatttcttctcgaacaagag
aaagaaacgtgtagaagcacaacactgtataaatcgtacttgaagtga
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