Solenopsis invicta (red fire ant): 105200054
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Entry
105200054 CDS
T03916
Name
(RefSeq) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105200054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105200054
03009 Ribosome biogenesis [BR:
soc03009
]
105200054
Messenger RNA biogenesis [BR:
soc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105200054
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
RNases
105200054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF3599
DUF1091
DUF5750
Motif
Other DBs
NCBI-GeneID:
105200054
NCBI-ProteinID:
XP_011165727
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All DBs
Position
7:complement(9868498..9871266)
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AA seq
188 aa
AA seq
DB search
MIRASRSDHYIVWIDLEMTGLDVDKDHILEIACLVTDKNLNVISEDLNIVIHQSDIILEN
MNDWCKENHTKTGLTQNSRSSTVSLEEAEKMVLNFLKKYTLERSCPLAGSSVYMDRFFLH
KYMPLVNEYLHYRIIDVSTVKEIARRWNPGVLNSMPKKKLNHRALDDIKESINELRYYKK
NFFKITTW
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgattagagcatccagaagtgatcactatattgtttggattgatctggagatgactggg
cttgatgtagacaaagatcacatattagaaattgcctgcctcgtgacagataaaaactta
aatgttatcagcgaagacttgaacattgtaatacatcagtcagacataatattagaaaat
atgaatgattggtgtaaagaaaaccacacaaagacgggattaacacaaaactctcgttcg
agtacagtgtcattggaagaggctgagaagatggtacttaacttcttaaaaaaatatact
cttgaacgttcatgtccattggctggaagttctgtgtatatggatcgtttctttctacac
aaatatatgccattagttaatgaatacttgcactacaggattattgatgttagcacagtt
aaggaaattgctagaagatggaatccaggagtattaaactcaatgccaaaaaagaaacta
aatcatagggctctggatgatataaaagagagcattaatgagctgaggtattacaaaaaa
aacttttttaagataacaacttggtaa
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