Spinacia oleracea (spinach): 110797009
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Entry
110797009 CDS
T05137
Name
(RefSeq) serine--tRNA ligase-like isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110797009
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soe01007
]
110797009
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soe03016
]
110797009
Enzymes [BR:
soe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
110797009
Amino acid related enzymes [BR:
soe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
110797009
Transfer RNA biogenesis [BR:
soe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110797009
Prokaryotic type
110797009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
PI3K_P85_iSH2
YabA
HDA2-3
A_amylase_dom_C
Motif
Other DBs
NCBI-GeneID:
110797009
NCBI-ProteinID:
XP_021857789
UniProt:
A0A9R0IYB6
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Position
4:155716674..155721447
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AA seq
468 aa
AA seq
DB search
MLDINLFRENPDKIRESQKVRFADVAIVDEIISLDQEWRKRQFELETLRKDFNRINKEVA
RLKIAGEDASELIRSTEENKKLTADKDAEVQEVKAALYAKLELVGNRVDDSVPISNDEAD
NAVIRTWGEKRTESKLKNHVELVELLGIVDTKKGSNVAGARGFYLKGDGVLLNQALINFG
LGFLSSKGYTPLMTPFFMRKDIMAKCAQLSQFDEELYKVTGEGDDKYLIATAEQPLCAFH
LGDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCLTSPLENKSWEM
HEEMLQNSEEFYQQLGLPYQIVAIVSGALNDAASKKLDLEAWFPASRAYRELVSCSNCTD
YQSRRLEIRYGQKKVSSLILSNEQRKEYVHLLNSTLTATERTLCCVLENYQKEDGVEIPQ
VLRPFMYGKTFLPFQSKPAPESKGKMSKAALNIQRGIHRLALPLLRNV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttggacataaatttattcagggaaaaccctgataaaatccgcgaatctcaaaaagtt
cgttttgccgatgtcgccattgtcgacgagattatcagcctcgatcaagaatggcgcaaa
cgtcaatttgagttggagaccttgcgcaaggacttcaataggatcaacaaagaggtggca
cgcttgaaaattgctggtgaggatgcatctgaattgatcagaagcacagaagagaataag
aaattaactgccgataaagacgctgaggttcaagaagttaaggctgcattatatgccaaa
ttggaattggttggaaatcgggttgatgattcagtccccattagcaatgatgaggcggac
aatgctgtgattcgaacatggggtgaaaagagaacagagtcaaagttgaaaaatcatgtt
gagcttgttgagcttctgggaatagtagacacaaagaaaggctctaatgttgctggggct
agaggtttttacttgaaaggcgatggtgtgcttctaaatcaagctctgataaattttggt
cttggttttctgtcatcaaaaggatatacaccattaatgaccccattcttcatgcggaaa
gatatcatggcaaaatgtgctcaattatcccaattcgatgaagaactttacaaggtaact
ggcgagggagatgacaaatatcttattgccactgctgagcagccactctgtgctttccac
ttgggcgattggattcatccttcgcaactcccgataagatatgcaggatactcatcgtgc
tttcgtaaagaggcaggttcacatgggagagatactcttggaattttccgagtccaccag
tttgagaaaattgaacagttttgcctcactagcccacttgaaaataaatcatgggaaatg
cacgaggagatgttacagaactcagaagaattttatcagcagctgggccttccttatcag
atagtggccattgtttctggtgccctgaatgatgcagcttcaaagaagcttgatttggaa
gcttggttccctgcctctagagcatacagagagttggtgtcgtgttctaactgtacagac
taccagtcaagaagattagaaataagatatggccagaaaaaggtatcctctttaatcttg
agcaatgaacaaagaaaggagtacgtacatctgctgaattcaactctgacagcaactgaa
agaaccttgtgctgtgttctggagaactatcagaaggaagacggagttgaaataccacaa
gttttaagaccattcatgtatgggaagactttcttgcctttccaaagcaaacccgctcct
gaatcaaagggaaagatgtctaaagctgccttaaatattcaacgaggcatacaccgtctt
gctttgccgttgctcagaaatgtttaa
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