Spinacia oleracea (spinach): 110804571
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Entry
110804571 CDS
T05137
Name
(RefSeq) probable galacturan 1,4-alpha-galacturonidase SALK6
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Module
soe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110804571
Enzymes [BR:
soe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
110804571
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110804571
NCBI-ProteinID:
XP_056693846
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Position
2:111924862..111927825
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AA seq
412 aa
AA seq
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METNTKLSVFFILFQWCIVAINGKPAPAGSAVFDISKHGLKSNGDATQALQSAWAAACAL
PTPSKVLVPKGTYMLHAINFQGPCKSRVTFEILGNFKAPADPAQFKGSDTWVRFCEIDGL
TITAPKGAGVFDGQGQMAWKVNDCSKSGNCDTLPYNFRFNFLTNAVINGITSVNSKLFHM
AVLGCKKVQMRGITVSAPKTSLNTDGIHVARSVGVNITNAHIKTGDDCISIGDGAKNVHI
EQITCGPGHGISVGSLGRYPNEEPVVGVTVKGCTFTNADNGVRVKTWLNSFKGSVTGLHF
EDIIVENVLNPIIVNQEYCPYNHCAQKNPSRVKLADIRFKNVRGTSGSREAVTIICSSGT
PCEKVQLTDINLKYKGKGGPAVSMCKNARPILTGKQIPPACSELATAAKDDF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaatacaaaactttcagtgttcttcatcttgtttcaatggtgcatcgtagcc
attaacggcaaaccggcccctgccggttctgctgtatttgacataagcaagcatggattg
aagtctaatggcgatgctacgcaggccttacagagtgcttgggccgcggcttgtgcattg
ccaactcctagcaaggtgttggtcccgaaaggaacctacatgctacacgcgattaacttc
caaggtccgtgcaagtcaagggtcacttttgaaattttagggaacttcaaggctccagca
gacccagcacagtttaaggggtcagatacatgggttagattttgtgagattgatggtttg
accattacagcacctaaaggagcaggtgtgttcgatggtcaagggcaaatggcctggaaa
gtcaacgattgctcaaaatctggaaattgtgatactcttccttataattttaggttcaat
tttttgacgaatgcagtaattaacggtataacttcagtgaacagcaaactgttccacatg
gcagtcttgggctgcaagaaagtacaaatgcgtggcattactgttagtgcaccaaaaact
agtttaaacactgatggtattcatgtagcacgttcagttggagtgaacataacaaatgca
catattaaaaccggagatgattgtatttccattggggatggagctaaaaacgtccatatc
gagcagatcacttgtgggcccggacatggtattagtgtaggaagtctaggtaggtaccct
aatgaggaacccgtggtcggcgtcaccgtgaagggatgcaccttcacgaacgcagacaat
ggtgttcgggttaaaacatggctcaactctttcaaaggtagtgtcaccggcctgcatttc
gaggacatcattgttgaaaatgttttgaatcctattattgttaatcaagaatattgcccc
tacaatcactgcgcacaaaagaatccctccagagtgaagcttgccgacattagattcaag
aacgtgaggggcacatcaggtagcagggaagcagtgacgataatttgcagcagcggcacg
ccatgtgagaaggtgcagctcactgatatcaacctgaaatacaaaggcaaaggtggtcct
gcagtttccatgtgtaaaaatgccaggcctatcctaacaggaaaacagatcccgcctgct
tgctctgaactagctacagctgctaaagatgacttttag
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