Shewanella oncorhynchi: RA178_15190
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Entry
RA178_15190 CDS
T09381
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_15190 (truC)
Enzymes [BR:
sog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
RA178_15190 (truC)
Transfer RNA biogenesis [BR:
sog03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
RA178_15190 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WMB71757
UniProt:
A0AA50KB27
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All DBs
Position
complement(3370258..3371103)
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AA seq
281 aa
AA seq
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MNQDDIWLETPENAVNVSQEDDSEEQAPEIEILYEDEHLVAIHKPAGLLVHRSYLARRER
FFAMQLTRDLVGCHVFPVHRLDRPTSGVLLFAKSSEVANALCEQFASHTVEKQYLALVRG
NMHESGILDYALKVELDELGDKNADPNKAAQEAVTAYEPLLNTEIPYPSGRYSTSRFALV
RLSPKTGRKHQLRRHMAHLRHPIVGDTTHGDGKQNAFFREHFGINRLWLIAKKLTFTHPI
TQTRLSIETELEPEWETVFAELGWDEATLSQQAELFIAQEV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagatgatatctggcttgaaacgcctgaaaatgcagtgaatgtatcccaagag
gatgattcagaagagcaggcgcctgagattgaaattctttatgaagatgagcacttagtg
gcaattcataaacctgcaggcttattggtccaccgcagttatttagcgcgtcgggagcga
ttttttgccatgcagttaacccgtgacttagtcggctgtcatgtgtttcctgtacatcgt
ctcgacaggccgacatccggcgtgctcttgtttgccaagagtagtgaagtggccaatgct
ctgtgtgagcaatttgcctcccatacggttgaaaaacaatatttggctttagtgcgcggt
aatatgcatgagagcggtattttagattatgcacttaaggttgagttggatgaattaggc
gataagaatgccgatcctaataaagcggcgcaggaggctgtgacggcgtatgagccgtta
ctcaatactgaaattccgtatccttcgggtcgatattccactagccgtttcgcactggtg
cgtttgagtcctaaaacggggcgtaagcatcagctcagaaggcatatggcacatttacga
caccccatcgtcggtgataccacccatggcgacggtaagcaaaatgcgttttttcgtgag
catttcggtattaatcgcctgtggcttatcgcaaaaaaactcacctttacacacccaata
actcaaactcggctcagcatagaaaccgagctcgagcctgagtgggaaaccgtgtttgcc
gagctaggttgggatgaggcgaccttgagtcagcaagctgagttattcatcgcccaagag
gtatga
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