Schaalia odontolytica: FBF35_00015
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Entry
FBF35_00015 CDS
T05977
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
soo
Schaalia odontolytica
Pathway
soo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FBF35_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_00015 (recF)
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FBF35_00015 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
QCT34562
LinkDB
All DBs
Position
2997..4193
Genome browser
AA seq
398 aa
AA seq
DB search
MRVSHLALDDFRSWKHGVVELPEGPTVLVGANGQGKTNLVEALAYLSTFSSHRVGAEGAL
VRIPIDEDEAAPGGAVIRARVVASGREQVIELEIVRGKANRARINRAQVKPREILGIVRT
VVFAPEDLSLVRGDPSVRRSFLDDLATQLSPIHASVRSDFDRVARQRAALMKAAQASLRR
GHSPDLSTLEIWDQQFAALSARITATRASIASRLEEPAARSYDDVADSPRHLRLAFDASV
DRVIGTDPENPASADLTNVDAQTERMLAALASVREKETERGVNLVGAHRDDLTLSLGAMP
VKGYASHGESWSVALALRLGAFELLSDDGDTPILILDDVFAELDSSRREGLAALASKAEQ
IIVTCAVAGDLPASLDHHALHVRLDPERGTVIDEADDE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtctcccacctggccctcgacgacttccgctcctggaagcacggggtcgtcgag
ctgcccgagggccccacggtcctcgtgggtgcgaacggccagggaaagacaaacctcgtc
gaggcgctcgcctacctgtccacgttctcgtcgcatagggtcggcgccgagggtgccctc
gtgcgcatccccatcgacgaggacgaggccgccccgggcggtgccgtcatccgcgcgcgg
gtcgtagcctcgggccgcgagcaggtcatcgagctcgaaatcgttcgcggcaaggccaat
cgcgcgcgcatcaaccgtgcgcaggtcaagccccgcgagattctgggcatcgtgcgcacg
gtcgtgtttgcacccgaggacctctcgctcgtgcgcggcgacccgtcggtgcgccgatct
ttcttggacgacctggccacgcagctctcccccattcacgcctccgtgcgctccgacttc
gaccgggtcgcgcgccagcgtgcggcgctcatgaaggccgcacaggcctcgcttcgtcgc
ggccactcccccgacctgtcgaccctcgagatctgggaccagcagttcgccgccctgtcc
gcgcgcatcacggccactcgcgcatccatcgcatcgcgcctggaagagcctgccgcgcgc
tcctacgacgacgtcgctgactccccgcgccacctgcgcctcgccttcgacgcctcggtc
gaccgcgtcatcggcaccgaccccgagaacccggccagcgccgacctcaccaacgtggat
gctcagaccgagcgcatgctcgccgccctcgcgtcggtgcgagagaaggaaaccgagcgc
ggcgtcaacctcgtcggcgcacaccgcgacgacctgaccctcagcctcggcgcgatgccg
gtcaagggctatgcctcgcacggcgaatcatggtcggtcgccctcgcgctgcgcctcggc
gccttcgagctgctcagcgacgacggcgacaccccgatccttatcctcgacgacgtcttc
gccgaactcgactcctcgcggcgcgagggcctggccgccctcgcctcgaaggccgagcag
atcatcgtcacctgcgcggtcgccggcgacctgcccgcctccctcgaccaccacgccctg
cacgtgcgcctcgaccccgagcgcggcaccgtcatcgacgaggccgacgatgagtga
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