Schaalia odontolytica: FBF35_05290
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Entry
FBF35_05290 CDS
T05977
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
soo
Schaalia odontolytica
Pathway
soo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FBF35_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_05290
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FBF35_05290
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBF35_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
QCT35479
LinkDB
All DBs
Position
1197379..1199361
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AA seq
660 aa
AA seq
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MTSQQGMLDGFDPPRSRAAEIARVLVDVDLPHMDRPLDYVVPDKFIDEAEVGRAVRVRFS
GTRVDGWIVERTRRDVLDDAAQIESVSSAIPVLTPALYEAARRIAHRFLATTSQVLSLAI
PPRHARGEKTVVQAHASAWPSVDAPTVSEGWASYRAGDALLHRLAAGESPRAVVTALRPR
MRACLSDAIAATVSSGRSAIIVAATGEDAARYARALEEDLGVPVAVTGGEVAPEERYRIH
VAATLGRLPIVVGTRSAAWVPCAKLGLIVICNDGDDRLRERRFPRCDVLDIAVQRCAVEG
AGLLVASFARSVKAQALVRSGWAVSLDPVPGALRDATPRVHLHGATEAEREGASGHMRIP
PAALRMIRQGLREGLVLIQVAASGYWPTVVCRRCSERARCRHCSGPLAVNSGGEVTCSWC
ARATGTWRCPHCSGTELRAARVGSTRTAEEIARNLPDASVLESSAAHRITRQLHSRPTVV
VATPGAEPDVDGGYAAAIILDAHALAGRAELWAPEEAARRWLNALSLVRPGHPGLVVGTI
PDALGQALVRWAPTDYADRLLDEREALGFFPATTMVALDGPAAQVRQVAEQVIRDGGAEL
VGTVVRPATREGEENEVRTLVRSPLAGATSMLAVLTDIRRSRSARKVPLVKMSVNPPELF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccaacagggcatgcttgacggtttcgatccgccgcggtctcgggccgcggag
atcgcacgcgtgctcgttgacgtcgatctgccgcacatggatcggccgctcgattacgtc
gttccagacaagttcatcgacgaggccgaggttggccgcgcagttcgcgtgcggttttcc
ggcacgcgcgtggacggctggatcgttgagcgtacacgtcgcgatgtgcttgacgatgcc
gcgcagatcgaatcggtatcgtctgcgatcccggtgttgacgcccgcactgtatgaggcc
gcgcgtcgcatcgcacatcgctttcttgctacgacgtcgcaggtcctgtcgctcgctatc
cctccgcgacatgcacgcggcgaaaagactgtcgtacaggcacacgcgtcggcgtggcca
tccgttgacgctccgactgtttctgaaggctgggcatcctatcgtgctggcgacgcgtta
cttcaccgccttgcagccggagagtctccgcgtgcagtcgtgaccgccctgcgtccccgg
atgcgcgcgtgtctgtcggatgccatcgctgccactgtttcgtcggggcgcagcgccatc
atcgttgctgccaccggagaggacgccgcgcgctacgcacgcgcacttgaggaggacctc
ggggtgcccgtcgctgtgacgggcggtgaggtggcgcccgaggagcgttaccgtatccac
gtagccgcgacactcgggcgtcttccgattgtggtcggcacgcggtcggccgcgtgggtt
ccgtgtgcgaagctgggcctcattgtcatctgcaacgacggcgacgatcgactgcgagag
cgcaggttccctcgctgcgacgttcttgatattgccgtgcagcggtgcgcggtggagggc
gcagggctccttgttgcttccttcgcacgctccgtgaaggcacaggctctcgtccgttct
ggatgggcggtcagtctcgatccggtgcccggcgcgctgcgcgacgcgactccacgcgtg
catctgcacggcgcgacggaagcagaacgtgagggcgccagcggccacatgcgcattccc
ccggcagcgttgcgcatgattcgccagggcctgcgcgaaggcctcgttctcatccaggtc
gcagcgtccggctattggcccacggtcgtgtgccgccgttgcagcgagcgagcgcgctgc
cgccattgctcgggtcctctcgcagtcaatagcgggggagaggtcacctgttcgtggtgc
gcccgcgccactggtacttggcggtgcccacactgctcgggaacagagctccgcgcagct
cgcgtgggatcgacgcgcaccgccgaagagatcgcgcgcaacctgccggacgcatcggtc
ctcgagtcatcggctgcacacagaatcacccgccaactgcactcacgccccacggtcgtc
gttgctacgccgggagctgagccagacgtggacggtggctacgccgccgccatcatcctc
gacgcgcacgctctggctgggcgagccgaactgtgggccccggaggaggctgcccggcgg
tggctcaacgcgctgtcccttgtccgcccaggccaccccggcctcgtcgtcgggacgatt
cccgatgcgttggggcaggcactcgtgcgctgggcccccaccgactacgccgatcgtctt
ctcgatgagcgcgaggccctgggcttctttccggccacgacgatggttgccctcgatggg
ccagcggctcaggtccgtcaggtcgccgaacaggtgattcgcgatggaggagctgagctg
gtcggcaccgtcgtgcgcccggcgacgcgcgagggcgaggaaaacgaagtacgcacactg
gtgcgcagcccgttggccggggcgacgtcgatgctcgcggtgcttaccgatattcgacgc
tcacgcagtgcgcgcaaggttccactcgtcaaaatgagcgtgaacccacccgagctcttc
tga
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