Streptococcus oriscaviae: INT76_10690
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Entry
INT76_10690 CDS
T08170
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sos
Streptococcus oriscaviae
Pathway
sos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INT76_10690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sos03019
]
INT76_10690
03009 Ribosome biogenesis [BR:
sos03009
]
INT76_10690
Enzymes [BR:
sos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
INT76_10690
Messenger RNA biogenesis [BR:
sos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
INT76_10690
Ribosome biogenesis [BR:
sos03009
]
Prokaryotic type
rRNA helicases
INT76_10690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QUE54263
LinkDB
All DBs
Position
2132572..2134146
Genome browser
AA seq
524 aa
AA seq
DB search
MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALQGKDVIGQAQTGTGKTAAFGLPTL
NKIDVANQAVQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLINRKALKLNTVETLILDEADEMLNMGFLDDIEAIIERVPESRQTLLF
SATMPEAIKQIGVKFMKEPEHVKVAAKELTTELVDQYYIRVKENEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQGKRLRVLRDFKSDNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQTGQSITFVSPNEMGYLAIIEDLTKK
RMKGMKPATAQEAFEAKKKVALKKIERDLADESIRANFDKFKKDAVKLAAEFSPEELALY
VLSLTVQDPDSLPEVEIAREKPLPFKFAPGQAKGKGGRSGRDRGGRRDGERNRDRSGRRG
ERPDRNHRDDKFKRDNRRQDSKKPHKRTSSEKKTGFVIRNKGDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttactgatttacaattgtcagaagacattttacttgccgttgaaaaggcaggt
tttgaaacaccgtcccctatccaagaacagaccattccattggctctgcaaggaaaggat
gtcatcggccaagcccagacaggtacagggaaaacggcagcttttggtctgccaaccctc
aataagattgatgtggcgaatcaggcagtacaagctctcgtgattgctccgacccgtgaa
ttagcggtgcaaagtcaggaagaactgttccgctttggacgcgagaaaggcgttaaggtt
cgctctgtttacggtggctctagcattgaaaaacaaatcaaggccctcaagtcaggtgcc
cacattgtggtaggaactcctggacgcttgttggacttgattaaccgcaaggctctcaaa
ctcaatacagttgaaactcttatccttgatgaagcagatgaaatgctgaatatgggcttc
ctagatgacattgaagccattattgagcgtgtgccagagagccgtcagaccctgctcttt
tcagcgaccatgccagaggctatcaagcaaatcggtgtgaagttcatgaaagagccagaa
cacgttaaggtggcagccaaagaattaacaacggaattggtcgatcagtactatatccgc
gtcaaggaaaatgaaaaatttgataccatgacccgcctgatggacgttgaccagcctgaa
ttatctatcgtttttggccgcaccaagcgccgtgtagacgaattgacccgcggtcttaaa
ctgcgcggtttccgtgcagaaggaattcatggagatttggatcaaggcaagcgtcttcgt
gtcttgcgtgatttcaaaagtgacaacctagatgtccttgttgcaacagacgttgcggcg
cgtggattggacatttcgggagttacccatgtctacaactacgacattcctcaagaccct
gaaagttatgttcaccgcatcggtcgtaccggccgcgctggacaaacaggccaatccatt
accttcgtttcaccaaatgagatgggctatttagccatcattgaagatttgaccaagaaa
cgcatgaaagggatgaaacctgcgacagctcaagaagcctttgaagctaagaaaaaagtt
gccttgaaaaagattgagcgcgacttggcagatgagagcattcgtgctaattttgataag
tttaaaaaagacgcggttaaattggcagcagagtttagtccagaagaactagccctctac
gttctcagcctgaccgtacaagatccagacagcttaccagaagtggagattgcgcgcgaa
aaaccattaccattcaagtttgctccaggccaagctaagggcaagggcggacgtagcggt
cgtgaccgtggtggccgtcgcgacggagaacgcaatcgtgatcgtagtggtcgccgaggg
gaacgccctgaccgcaatcaccgtgacgacaagttcaaacgcgataaccgtcgtcaggat
agcaagaagccacacaaacgcacttccagtgaaaagaagacaggatttgttatccgtaac
aagggcgacaagtaa
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