Solanum tuberosum (potato): 102579367
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Entry
102579367 CDS
T02981
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102579367
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sot01009
]
102579367
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102579367
Protein phosphatases and associated proteins [BR:
sot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102579367
Spliceosome [BR:
sot03041
]
Common components
Common spliceosomal components
SR proteins
102579367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
102579367
NCBI-ProteinID:
XP_015160464
LinkDB
All DBs
Position
Un
AA seq
233 aa
AA seq
DB search
MADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEETNPGNTLYVTGL
SSRVTQRDLEEHFSKEGKVKSAFLVEEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLE
GRSITVEKSRRKRPRTPTPGHYLGLHQSGRGDGYHGDRGRYRGRGDYGYRRSPRRSPYRG
GRDYSPRRSPYAEGRDVRDPGHILLMKGTTLVVIDKGVSQGTCGFLLSNENCL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaggtattcccgctctccttcaccttgggaagaaaagtca
aggtctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatccaggtcc
agaagtcatggaagggctgaagaaactaatcccggaaacacactctatgtgactggatta
tcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaag
tcagcttttctggttgaggagccccgttctcgcatctctcgtggttttgctttcataaca
atggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaa
ggccggtccataacagtggagaagtctcgtagaaaacgcccaaggactccaacacctggt
cattatcttgggcttcatcagagcggaaggggtgatggttatcatggtgatcgtggtagg
tatcgtggccgtggtgactatgggtaccgaagatctccaagacgctctccatatagaggt
gggagagattattctcctagacgctcaccttatgctgaaggtcgagacgtgcgcgatccc
ggtcatattctccttatgaaaggaactaccctcgtggttatagataagggggtttcacaa
ggcacatgcggtttcctcctcagcaatgaaaactgcttgtaa
DBGET
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