Solanum tuberosum (potato): 102596159
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Entry
102596159 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102596159
03041 Spliceosome [BR:
sot03041
]
102596159
03036 Chromosome and associated proteins [BR:
sot03036
]
102596159
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102596159
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102596159
mRNA cycle factors
Common to processing body (P body) and stress granule
102596159
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102596159
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102596159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102596159
NCBI-ProteinID:
XP_006360604
UniProt:
M0ZKR0
LinkDB
All DBs
Position
Un
AA seq
618 aa
AA seq
DB search
MRNSWADSVENVATDNGGPSGGSGASASTRRSSYVPPHLRNKPMTAEPLAPLHGGPPSGN
DRSGFNGPTSGPRWGGSRPDYGRQGGYGGGGRGGGWGGRGGGWGREREVNPFGNDADVDL
EQSFDQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEAANLNIRRCKYVKPTPVQ
RYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGDFPQRPHGSRTVFPLALILSPT
RELSMQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAK
VSLQMIRYLALDEADRMLDMGFEPQIRRIVEQMDMPPPGERQTMLFSATFPKEIQRLASD
FLANYIFLAVGRVGSSTDLIVQRVEFVHDVDKRSHLMDLLHAQMANGVHGKHNLTLVFVE
TKKGADALEHWLCINGFPATAIHGDRTQQEREQALRTFKRGDTPILVATDVAARGLDIPH
VSHVINFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDGNLSMAKPLADLMQEANQDVPE
WLTRYASRSSFGGGRNRRAGGGRFGGRDFRRDSSYNRSGGGGGGGGGGGMNYYDGGNSSG
GYGNYSGGYGPGVTSAWD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaggaactcatgggcagattctgttgagaatgtagctactgataatggtgggcctagt
ggtggtagtggagcttctgcttctacaaggagatcatcttatgtcccaccacatcttcgc
aacaaaccaatgacagcagaacctctagctccattgcacggtggcccaccttctggtaat
gaccgctcagggtttaatggaccaactagtgggcctcgatggggtggttctaggccagat
tacggacgccaaggggggtatggtggcggtggcagaggaggtggttggggtggcagagga
ggtggttggggtagagagcgggaagttaacccgtttggtaatgatgcagatgtggacttg
gagcaatcgtttgatcaggagaatactggtataaattttgatgcttatgaggatattcca
gtggaaacaagtggagaaaatgtgccacctcctgttaatacatttgcagagatagattta
ggggaggccgctaacttgaatattaggaggtgcaaatatgtgaagccgactcctgtccag
cgatatgcaattcccatctccttagcaggacgagatctcatggcctgtgcccagactgga
tctggcaagacagctgccttttgtttcccaattattagtggaatcatgaggggggatttt
ccgcaacggcctcatgggtcgcggacagtttttccccttgctcttattctctcaccaaca
agagagctctcaatgcagatacacgaggaagctaaaaaattctcttatcagactggtgtt
agagtggtagtggcctatggtggagccccgattaatcaacagctccgagagcttgagaga
ggagttgatattcttgtggcaactcctggaagactggtcgatttacttgagagagcaaaa
gtttcattacagatgattagatatttagctctcgatgaggcagatcgtatgctggacatg
gggttcgaacctcaaatcagaaggatagtggagcaaatggatatgcctccacctggtgaa
agacagactatgctgttcagtgccacattcccaaaagagattcagagactggcatctgat
tttcttgcaaactacatatttttggcagttggacgggttggttctagtactgatttgatt
gttcagcgagttgagtttgttcatgatgttgacaagagaagccatcttatggatctactt
catgcacagatggctaatggggttcatggcaagcataatctaactttggtatttgtcgaa
acaaagaagggtgctgatgcattggagcattggctgtgtattaatggatttcctgcaact
gccattcatggtgataggactcagcaggaaagggagcaagcgttgagaacattcaagaga
ggagataccccaattttagttgcgacggatgtggctgctcgaggccttgatatccctcat
gtttctcatgttataaactttgaccttcctaatgacattgatgattatgtgcaccgtata
ggcaggacaggtcgtgcaggcaagacaggattagcaactgctttctttaatgatggtaac
ctttccatggccaaaccgctagctgacttgatgcaagaagctaatcaagatgtacctgaa
tggttgactcgttatgctagccgttcatcattcggaggaggcagaaacaggcgagctggc
ggagggcgttttggtgggcgtgacttcaggagggattcgtcatacaatagaagtggaggc
ggaggtggaggcggaggcggaggtggtatgaattactatgatggaggtaatagtagtggt
ggttatggcaattatagtgggggatatggtcctggagtaactagtgcttgggactag
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