Spathaspora passalidarum: SPAPADRAFT_50766
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Entry
SPAPADRAFT_50766 CDS
T03101
Name
(RefSeq) DNA replication factor C
KO
K10756
replication factor C subunit 3/5
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03030
DNA replication
spaa03410
Base excision repair
spaa03420
Nucleotide excision repair
spaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAPADRAFT_50766
03410 Base excision repair
SPAPADRAFT_50766
03420 Nucleotide excision repair
SPAPADRAFT_50766
03430 Mismatch repair
SPAPADRAFT_50766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spaa03032
]
SPAPADRAFT_50766
03036 Chromosome and associated proteins [BR:
spaa03036
]
SPAPADRAFT_50766
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_50766
DNA replication proteins [BR:
spaa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SPAPADRAFT_50766
DNA Replication Termination Factors
ELG1-RFC complex
SPAPADRAFT_50766
Chromosome and associated proteins [BR:
spaa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SPAPADRAFT_50766
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SPAPADRAFT_50766
Check point factors
HRAD17(Rad24)-RFC complex
SPAPADRAFT_50766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
ResIII
AAA_assoc_2
Rad17
RuvB_N
AAA_11
AAA_22
DNA_pol3_delta
DUF815
AAA_16
AAA_30
AAA_24
AAA_5
DEAD
AAA_7
bpMoxR
TIP49
AAA_19
Mg_chelatase
SLFN-g3_helicase
AAA_3
Viral_helicase1
IstB_IS21
AAA_18
nSTAND3
ATPase_2
AAA_2
RNA_helicase
AAA_28
DUF3419
Motif
Other DBs
NCBI-GeneID:
18871481
NCBI-ProteinID:
XP_007375461
JGI:
50766
UniProt:
G3APL4
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MSDTLPWIEKYRPESLDDIYGQQEIITTVHKFIQTGKLPHLLFYGPPGTGKTSTIIAVAR
EIYGKNYKNMVLELNASDDRGIDVVRNQIKNFASTRQIFNQGNSFKLIILDEADAMTNAA
QNSLRRIIEKFTKNCRFCILANYSHKLNPALISRCTRFRFHPIDTEAIRERIKVVITKEQ
VDIDAKAVDALVQLSKGDMRRALNVLQACKAATAGSIDLDMIYECIGAPHPQDIETVLDS
ILKDDWTTAYITINKFKTTKGLALIDLIAGFVDILNNYKLNNKTRVGILKGLSDIEYGIS
KGGNDKIQSSAIIGVIKSAMENE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacattaccatggattgaaaagtatcgtccagaatctcttgacgacatctat
ggccagcaggaaatcatcaccaccgttcacaagttcatccaaacggggaaattaccccat
ttgttgttctacggcccaccaggaacaggaaagacatcgaccattattgctgttgcccgg
gagatctacggaaaaaactacaagaacatggtgcttgaattgaacgcatccgacgatcga
ggcatcgacgttgttcgtaaccaaatcaagaactttgccagcacaagacagatattcaac
cagggaaacagcttcaagttgatcatcttggacgaagctgacgccatgactaatgcagct
cagaactcgttaagacgtatcattgagaagttcaccaagaactgtcgtttctgtatcttg
gctaactattcacataagctaaacccagcgttgatttcgagatgtacgcgattcagattc
catcccattgacactgaggcaatcagagaaagaatcaaagtggtcattacaaaagagcag
gtggacatagatgcaaaggctgtggatgcgcttgttcaactctcgaaaggtgatatgaga
cgagcattgaatgtgttgcaagcgtgcaaggcagcaaccgcaggatcgatagacttggat
atgatctatgaatgtattggtgcaccccatccgcaagatatcgaaacggtattggactcg
attctcaaagacgattggactaccgcatacatcactataaataaattcaaaacaaccaaa
gggttagcattgattgatttgattgcggggtttgttgatattttgaataattacaaattg
aataataagacaagggttggaatattgaaggggttgagtgatatcgaatatggaatttcc
aaaggtggtaatgataagattcaaagtagtgcgattattggtgttatcaagagtgctatg
gagaatgaatag
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