KEGG   Spathaspora passalidarum: SPAPADRAFT_50766
Entry
SPAPADRAFT_50766  CDS       T03101                                 
Name
(RefSeq) DNA replication factor C
  KO
K10756  replication factor C subunit 3/5
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03030  DNA replication
spaa03410  Base excision repair
spaa03420  Nucleotide excision repair
spaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPAPADRAFT_50766
   03410 Base excision repair
    SPAPADRAFT_50766
   03420 Nucleotide excision repair
    SPAPADRAFT_50766
   03430 Mismatch repair
    SPAPADRAFT_50766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spaa03032]
    SPAPADRAFT_50766
   03036 Chromosome and associated proteins [BR:spaa03036]
    SPAPADRAFT_50766
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_50766
DNA replication proteins [BR:spaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPAPADRAFT_50766
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPAPADRAFT_50766
Chromosome and associated proteins [BR:spaa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPAPADRAFT_50766
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPAPADRAFT_50766
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPAPADRAFT_50766
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 ResIII AAA_assoc_2 Rad17 RuvB_N AAA_11 AAA_22 DNA_pol3_delta DUF815 AAA_16 AAA_30 AAA_24 AAA_5 DEAD AAA_7 bpMoxR TIP49 AAA_19 Mg_chelatase SLFN-g3_helicase AAA_3 Viral_helicase1 IstB_IS21 AAA_18 nSTAND3 ATPase_2 AAA_2 RNA_helicase AAA_28 DUF3419
Other DBs
NCBI-GeneID: 18871481
NCBI-ProteinID: XP_007375461
JGI: 50766
UniProt: G3APL4
LinkDB
Position
Unknown
AA seq 323 aa
MSDTLPWIEKYRPESLDDIYGQQEIITTVHKFIQTGKLPHLLFYGPPGTGKTSTIIAVAR
EIYGKNYKNMVLELNASDDRGIDVVRNQIKNFASTRQIFNQGNSFKLIILDEADAMTNAA
QNSLRRIIEKFTKNCRFCILANYSHKLNPALISRCTRFRFHPIDTEAIRERIKVVITKEQ
VDIDAKAVDALVQLSKGDMRRALNVLQACKAATAGSIDLDMIYECIGAPHPQDIETVLDS
ILKDDWTTAYITINKFKTTKGLALIDLIAGFVDILNNYKLNNKTRVGILKGLSDIEYGIS
KGGNDKIQSSAIIGVIKSAMENE
NT seq 972 nt   +upstreamnt  +downstreamnt
atgtcagacacattaccatggattgaaaagtatcgtccagaatctcttgacgacatctat
ggccagcaggaaatcatcaccaccgttcacaagttcatccaaacggggaaattaccccat
ttgttgttctacggcccaccaggaacaggaaagacatcgaccattattgctgttgcccgg
gagatctacggaaaaaactacaagaacatggtgcttgaattgaacgcatccgacgatcga
ggcatcgacgttgttcgtaaccaaatcaagaactttgccagcacaagacagatattcaac
cagggaaacagcttcaagttgatcatcttggacgaagctgacgccatgactaatgcagct
cagaactcgttaagacgtatcattgagaagttcaccaagaactgtcgtttctgtatcttg
gctaactattcacataagctaaacccagcgttgatttcgagatgtacgcgattcagattc
catcccattgacactgaggcaatcagagaaagaatcaaagtggtcattacaaaagagcag
gtggacatagatgcaaaggctgtggatgcgcttgttcaactctcgaaaggtgatatgaga
cgagcattgaatgtgttgcaagcgtgcaaggcagcaaccgcaggatcgatagacttggat
atgatctatgaatgtattggtgcaccccatccgcaagatatcgaaacggtattggactcg
attctcaaagacgattggactaccgcatacatcactataaataaattcaaaacaaccaaa
gggttagcattgattgatttgattgcggggtttgttgatattttgaataattacaaattg
aataataagacaagggttggaatattgaaggggttgagtgatatcgaatatggaatttcc
aaaggtggtaatgataagattcaaagtagtgcgattattggtgttatcaagagtgctatg
gagaatgaatag

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