Streptomyces paludis: DVK44_13390
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Entry
DVK44_13390 CDS
T06964
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
spad
Streptomyces paludis
Pathway
spad00550
Peptidoglycan biosynthesis
spad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DVK44_13390 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spad01002
]
DVK44_13390 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spad01011
]
DVK44_13390 (dacB)
Enzymes [BR:
spad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DVK44_13390 (dacB)
Peptidases and inhibitors [BR:
spad01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DVK44_13390 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
spad01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DVK44_13390 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AXG78545
UniProt:
A0A345HPC1
LinkDB
All DBs
Position
complement(3054143..3055636)
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AA seq
497 aa
AA seq
DB search
MLEPKVWQVTAGSVVLGLTLAAVVVAAAGPWDSGQRRAEREWAVAQSRTGGEARDASAPR
EPAPAPSAAAVLSALRVTGRGAAESNGTGGTAGAGETGGMSGIGGTGKPPALPSGLAAAL
GPLLDDGALGPDRTASVVDAVTGERLYGKGDAKTMVPASTIKIATVVAALSALGPDHRIA
TTVRATPDGRRITLVGGGDATLDRTGLGRLADDTVRALRDRGVTEVELRYDTSLYSGPRE
HPIGPNDNIAPVVSLMSGQGRLDTSASGPAPRSGNPAGDAARVFAKLLRERGVRTDGAPE
RSRAPKEAEPLARTYSAPLSALAERALTNSDNDIAESLARQTALAAGEPASFEGAGRAVR
AQLRKLQLPVTGAVFDDGSGLSRKDRVSAALLTGLLARAAAPDRPELRPVLTGLPIARFS
GTLRTRYADQPPAAGFVRAKTGTLTGVNALAGTVVDAEGRLLAFAFLASDTPAADPAQAA
LDRLSAALLPAPAARPE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgagccgaaagtgtggcaggtcacggcgggttcggtggtcctggggctgacgctc
gcggccgtggtggtggccgcggccggcccctgggattcggggcagcgcagggccgagcgg
gagtgggcggtcgcccagagccgtacgggcggcgaggcccgcgacgcgtccgcgccgcgc
gagccggcgcccgcgcccagcgccgccgcggtgctctccgcgctccgggtcacgggccgc
ggcgccgccgagtccaacgggacgggcgggaccgctggggcgggcgagaccggcgggatg
agcgggatcggtggcaccggaaagccccccgcgctgccgtccggactcgcggcggccctc
ggccccctcctcgacgacggcgcgctcggcccggaccgtaccgcctccgttgtggacgcc
gtcaccggcgagcggctgtacgggaagggcgacgcgaagacgatggtcccggcatccacg
ataaagatcgccaccgtggtcgccgcgctctccgcgctcggccccgaccaccgcatcgcc
accaccgtccgggccacccccgacggacggcggatcaccctggtcggcggcggcgacgcc
accctggaccggaccgggctcggccggctcgccgacgacaccgtccgcgccctgcgcgac
cggggcgtcaccgaggtcgagctgcggtacgacacatccctctactccggcccccgggaa
caccccatcggccccaacgacaacatcgcccccgtcgtctccctgatgtccgggcagggc
cggctcgacacctcggcgagcgggcccgcgccgcgcagcggcaacccggcgggcgacgcc
gcccgcgtcttcgccaaactcctgcgcgagcggggcgtccgtaccgacggcgcacccgaa
cggagcagagcgcccaaggaagcggagccgctcgcgcggacctactccgccccgctctcc
gccctggccgaacgcgcgctgaccaacagcgacaacgacatcgccgagtccctggcccgc
cagaccgccctggccgcgggcgagcccgcgagcttcgagggcgccggcagagccgtccgc
gcccagctccggaagctccaactgcccgtcaccggggccgtgttcgacgacggcagcggt
ctcagccgcaaggaccgggtcagcgccgccctgctcaccggcctgctggcgcgcgccgcc
gccccggaccggccggagctgcgcccggtcctgaccggcctgcccatcgcccgcttcagc
ggcacgctgcgcacccggtacgcggaccagccgccggcggccggtttcgtgcgggccaag
accggcacgctcaccggggtcaacgccctggcgggcacggtggtggacgccgaggggcgg
ctgctggccttcgcgttcctggcgagcgacaccccggccgccgaccccgcccaggcggcc
ctggaccggctctcggcggccctgctcccggcgccggcggcccgtcccgagtga
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