Sporosarcina pasteurii: E2C16_05945
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Entry
E2C16_05945 CDS
T06007
Name
(GenBank) PAS domain S-box protein
Organism
spae
Sporosarcina pasteurii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
HTH_8
PAS_4
PAS_8
PAS_10
PAS_7
AAA
AAA_5
HTH_30
sCache_3_3
AAA_2
PglD_N
SAF
DUF2960
TsaE
Motif
Other DBs
NCBI-ProteinID:
QBQ05241
LinkDB
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Position
complement(1226316..1228355)
Genome browser
AA seq
679 aa
AA seq
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MQNVLIIGAGTGGSIILDLLQNVELMNVSAIIDTDEYAPGIIRAKELGISFGNDWRKFLH
DNVHIIFDVTGDELVFSQLLEAKHSQTVLIPGSVANLIVQLLQENHTYTKRIRAEMHKQR
LIFDSIDEGMVGINANCEVDFFNKRASEMVGISIEDAIGKKVTDVIPLTKLKDVFKSGKS
EVNQELVLANGLEIMTSRFPLYDQKGEIVGAFAVFKDMTEAIALAKEITDLEKVQTMLEA
IIYSSDDAISVVDENGYGILVNPAYTRITGLTKDEVIGKPATADISEGESIHMKVLETKK
PVRGVNMRIGENNNEVIVNVAPILMDDELKGSVGIIHDITEMRNLMNELDQARAIIRELE
STNTFNDIRGDSAEIKIAIEQARIATDNDFTVLLRGEVGSGKALFAQAIHSEGTRKFNKF
IRVNCTAIPPDVLEAKLFGKFSEGEKGKKEKTGLFEEIDNGTLFLDEIADLSLSTQRKLL
HYLKTGEFYAVGSARPIQTSVHIITATCQNLEKAIHDGTFLAELYYLLNRIAIQIPPLRS
RKEDIAPIVQHLLVKLNNELGMNVEVISYEAKRLLEQYDWPGNIRELENVINRAMIYMEQ
SEMILEAADVKKSLFSSNRSKEKSSLPAKSTLTSMMDDYERSILEQALTENEGNKSETAN
RLGISLRSLYYKLDKYNLA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacgttcttattattggtgcaggaacaggtggctcaataatactagatcttctc
caaaacgtagaattaatgaatgttagtgcaataattgacactgatgaatatgcaccaggc
attattcgtgcaaaagaacttgggatttcatttggtaacgattggcgaaagtttttacac
gataatgtacacattatttttgatgttactggtgacgaattggtgttcagtcaactttta
gaggcaaagcattctcaaactgtgttaattccggggtcagttgcaaatctaattgttcaa
ttactacaagaaaatcatacatatacaaaacggatacgtgcagaaatgcacaaacaacgc
ctcatttttgattcaattgatgaaggaatggtaggaattaatgcgaattgtgaagttgac
ttttttaacaagcgggcatcagaaatggttgggatttcaattgaagacgcgattggaaaa
aaagttaccgatgtaattccattgacaaagcttaaagatgtatttaaatctggaaagtca
gaagtcaaccaggaacttgtccttgcaaatggcctcgagattatgacgtcgagatttccg
ttatacgatcaaaaaggtgaaatcgttggggcatttgcagtgtttaaagatatgactgaa
gcaattgcactagcaaaggaaattacggaccttgaaaaggttcaaacaatgcttgaagca
attatttattctagtgatgacgccatttccgttgtggatgaaaacggttacggtatttta
gtaaatcctgcttatacacgcattacaggtttaacaaaagatgaagtgattggaaaacct
gcaacagcggatataagtgaaggtgagagtattcatatgaaagtgttagaaacaaaaaag
ccagttcgtggggtcaatatgcgaatcggcgaaaataataatgaagttatcgtaaatgtt
gcaccgatactaatggatgatgaattaaaaggcagtgttgggatcattcatgatatcact
gagatgagaaatttgatgaatgagcttgatcaagcaagagccattattagagaattagaa
tcgacaaatacatttaacgatatacgtggtgattctgcggagataaaaattgcgattgag
caagcacgcattgccaccgataatgatttcactgtattacttcgcggggaagttggaagt
ggaaaagcattatttgcacaagcaattcatagtgaaggtacgcgaaagtttaataagttt
attcgggtaaattgtacagccattccccctgatgttcttgaagcaaaactttttgggaag
ttttcagaaggtgaaaaaggaaagaaagaaaaaactgggttatttgaggaaatagacaat
ggaacattatttttagatgaaattgctgatttatcgctttctacccaacgtaaactgctt
cactatctaaaaacgggagagttttatgcagtaggcagcgcgcgaccgattcagacatct
gttcatatcatcacagcaacgtgccaaaatctagaaaaagcaattcacgacggtacattt
ttagcagaactttattacttattaaatcgtattgccattcaaattccgccacttcgcagt
cggaaagaagatatcgcaccaatcgtgcaacatttactagtcaaattaaacaatgaactc
ggcatgaacgtagaagtgatatcctacgaagcgaaacgattgcttgagcaatacgattgg
cctgggaatattagggaactagaaaacgttataaatcgggcaatgatttatatggagcaa
agcgaaatgatactggaagcagccgatgtgaaaaaatctcttttctcatccaataggagt
aaagagaaatctagtttgccagctaaaagtacattgacttcgatgatggatgactatgaa
cgttctatcttggaacaagcgctgaccgagaatgaagggaataaatcagaaacggctaat
cggttagggatttcactccgttctttatattataaactcgataaatataatcttgcctag
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