Saccharomyces paradoxus: SPAR_P04200
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Entry
SPAR_P04200 CDS
T08193
Name
(RefSeq) Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spao
Saccharomyces paradoxus
Pathway
spao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAR_P04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_P04200
Spliceosome [BR:
spao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SPAR_P04200
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
54634362
NCBI-ProteinID:
XP_033769917
UniProt:
A0A8B8V1N3
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Position
XVI:852755..854152
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AA seq
465 aa
AA seq
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MSKGIALENLPVDLQHRGVTQNESTADILSQLPHERLQAVLEKIPEDDLEVRNLLLILKK
PEVVENEDVQQRRMRLAEMLMADEIDPGSINNTEGINGEEEDEEDDEEFFTPATSELIQA
RKFLIKYSLDRSRKRLQKEMERHQKFNTRQELLSRRTELRRMANLELAGSQLLSTKPISA
VSLSPDDMVVATGSWAGDLRVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMVSCGED
GLIKNFQYLYEEGELRLLGDLVGHERRVSDVKYHPSGKFIGSASHDMTWRLWDASTHQEL
LLQEGHAKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPVYSVAWSTN
GYQVATGGGDGLINVWDIRKRDEGQLNQILAHRNIVTQVQFSKDDGGKKFVSCGYDNLIN
VYSSDTWLKMGSLEGHTDKIISLDISSDSHFLVTGGWDRSIKLWN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggtattgcacttgaaaaccttccagttgatttacaacatagaggagtcaca
caaaacgaaagcactgctgatatactgagccagctgccacatgaacgattacaagccgtc
ctagaaaagataccagaagatgatcttgaggtgagaaacttgcttttaattctgaaaaaa
ccggaagtagtggagaatgaagatgtacaacagcgaagaatgcggttggctgaaatgcta
atggctgacgaaattgatcctggtagtattaataacacggaagggataaacggtgaagaa
gaagatgaggaagacgatgaagagttctttactccagcaacatctgaactcatccaggcg
agaaagtttttgataaaatattcacttgatagatctcgaaagaggttacagaaagagatg
gaaagacatcaaaagttcaatacaagacaagaattacttagtcggcgtacggaactacga
cgtatggctaatttagagctcgctggttctcaattgttatctacaaagcctatttcagca
gtttctttatctcccgatgacatggttgtcgcaactggaagctgggcaggtgatcttcgg
gtattaaattctcaaacactgcagccgttgacgcaaaaactcgattctcacgtaggaaaa
attggggctatagattggcatcctgattcaaacaaccaaatggtttcatgcggggaagac
gggctcatcaaaaactttcaatatttatacgaagagggcgaacttagattattgggagat
ctcgtgggacatgaaagacgcgtttctgatgtgaaataccaccctagtggcaaatttata
ggcagcgcctctcacgatatgacttggagactttgggatgcatcaacacatcaggaacta
ttactacaagaaggccatgctaagggcgtatttagtctgtcttttcaatgcgatgggtct
cttgtttgtagcggtggcatggactccctttcaatgctatgggacatacgatctggaagt
aaagtgatgaccctagcaggacactccaagcctgtttactccgtagcttggtcaacaaac
gggtaccaagtagccactggtggtggtgatggattaattaatgtttgggacatcagaaaa
cgtgatgaaggtcaattaaatcaaatattggcgcatcgtaacatcgttacgcaagtgcag
ttttcaaaagacgacggcggcaagaaatttgtctcttgtggttatgataatttgatcaat
gtgtatagtagtgatacatggttaaaaatgggaagtctagaaggtcacactgataaaatt
ataagtttggatatttcaagcgattctcattttttagtgaccggtggttgggataggtct
attaagctctggaattga
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