Saprolegnia parasitica: SPRG_06952
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Entry
SPRG_06952 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPRG_06952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_06952
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_06952
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_06952
Enzymes [BR:
spar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SPRG_06952
Messenger RNA biogenesis [BR:
spar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPRG_06952
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
90S particles
RNase
SPRG_06952
Prokaryotic type
rRNA processing factors
SPRG_06952
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SPRG_06952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-GeneID:
24129265
NCBI-ProteinID:
XP_012201807
UniProt:
A0A067CLE5
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MEKTSIIVDDDEYIFDGFFLLGADAMPPMEYVRSGVKCTLALVPQELPPHQYEHDAMLSF
EQFVLWQLLRIPISELPGFQGDRGMHLYPRFVFRKDQTSETLRQVTASHRLGFGIGALLP
LPALLNHVQESSSTTAHAFMRTHSEARLRYHVVSTRAKQDYFRIDRANAFLGQVYHEGRG
APAHDGVADLRQFNAHQRLGAIHCIATPVEKCSFGQRASECYLSGLKADVIEIATALPLL
TRTLAHMRQLQALQATWGLSFRTPALCHEAFVHVSYIECGISSANCAPAIHARVRLGMPL
SRPSLSSTKKRKTPMSELESIVDAHDDRDFQRLDPSPNLRSYGRLEFLGDAALSLVAACA
TFLRLRAAPEGQLTTMRASIVSNDTIGEMAMKVGLQHLVLCAYDVTTAPVKLVQKIAADC
LEALLGALLVDLGLDEGMVAVRALFSAMVKAYDPELHELLFLSEDALRAEARIYLDEDAA
AFQAHPQAAWLLSQKTKFEAAHASVPRLDRPHVWVRALTHKSFWSPSIDHTASYVPSGPG
NYERLEFLGDAVLEVVVSYHLWSVFPHQHENLLSKVRSALVNNVRLGHVGAAHGFEDVIR
LGTNVVANGLRLPAVIADAFEALLAASFLENWSLLPVASFLQDALFPLLPEVVRHREWLS
PRQRLITYLRKVHPTADVIFQTTTPMDDSTQHAIALVLDGFLVCRASASTKDLATERAAT
KAMQLLGFP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacaagcatcatcgtcgacgacgacgagtacatctttgacggcttcttcctc
ctcggcgccgacgccatgccacccatggagtatgtgcgcagtggcgtcaagtgcacgctg
gcgctcgtgccacaggagctgccaccgcaccagtacgagcacgacgcgatgctctcgttc
gagcagtttgtgctctggcagctgcttcgcatccccatctcggagctcccgggctttcaa
ggcgaccgtggcatgcacctctacccgcgctttgtctttcggaaggaccagacgtccgag
acgctgcgtcaggtgacggcgtcgcatcgcctcggctttggcatcggggcgctcttgccg
ctccctgcgctcttgaaccatgtgcaagagtcgtcgtcgacgacggcccatgcgttcatg
aggacgcactcggaggcgcgtcttcggtaccacgtcgtgtcgacacgcgcgaaacaagac
tactttcgcatcgaccgcgccaatgccttcttgggccaagtctaccatgaagggcggggg
gcgccagcccacgacggcgtcgccgacctgcgccagttcaatgcccatcagcgcttgggg
gcaatccattgtatagccacaccggtggagaagtgcagctttggccagcgcgcgtccgag
tgctacctctcgggtctcaaggctgacgtcatcgaaattgcgaccgcgctgccgcttttg
acgagaacgttggcccacatgcgacaattgcaggcgttgcaagcgacgtggggtctttcg
tttcggacgccggcgctctgccacgaagcgttcgtgcacgtctcgtacatcgagtgcggc
atttcgtcggccaactgcgcccccgccatccacgcccgcgtgcgactgggcatgccgctt
tctcgcccgtcactgtcgtccacgaagaagcggaaaacaccgatgtcggagctcgagtcg
attgtcgacgcgcacgacgaccgagactttcaacgcttggacccgtcgccgaatctgcgg
tcgtatggccgcctcgagttcctcggcgatgcggcgctgagcctcgtggctgcgtgtgcc
acctttcttcggctgcgcgcagcccccgagggacagctcacgacgatgcgcgccagcatt
gtgagcaacgacaccatcggcgagatggccatgaaagtggggctccagcatctcgtcctc
tgcgcctacgacgtgacgaccgcgcccgtgaaactggtgcaaaagatcgctgccgactgc
ttggaagcccttcttggcgcgcttctcgtcgacctcggtctcgacgagggcatggtggct
gtccgcgccctcttttctgccatggtcaaagcgtacgaccccgagctccacgagcttctc
ttcctctcggaagacgcgctgcgggcggaggcgcgaatctacttggacgaagacgcggcg
gcgtttcaagcgcacccgcaagcggcttggctcctctcgcaaaagaccaagtttgaggcc
gcgcatgcctccgtgcctcgtctcgatcgcccgcacgtctgggtccgcgcgctcacgcac
aagtcattttggagcccgagcatcgaccataccgcgtcgtacgttcccagtggtcctggc
aactacgagcggctcgagtttctcggcgacgccgtgctcgaagtcgtcgtctcgtaccat
ctgtggagcgtgtttccgcaccagcatgaaaacctcttgtctaaagtccggtcggcgctc
gtcaataacgtacgacttggccacgtcggcgcggcccatggctttgaggatgtgattcgc
cttggcaccaacgtggtcgccaacggcctccgcctcccagcggtcattgcggacgcgttc
gaagcgctcctcgcagcctcgttcctcgaaaactggtcccttctgcccgtcgcgtctttc
ttgcaagacgctctcttcccgctcctgcccgaggtcgtgcggcatcgcgagtggctctca
ccgcgccagcgtctcatcacgtacctccgcaaagtgcatccgaccgccgacgtgatcttc
caaaccacgacgcccatggacgactcgacgcaacacgctatcgcactcgtccttgacggc
ttcctcgtgtgtcgggccagcgcatccaccaaggatctcgcgaccgagagagccgcgaca
aaggccatgcaactcctcgggtttccataa
DBGET
integrated database retrieval system
