Shewanella putrefaciens CN-32: Sputcn32_0003
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Entry
Sputcn32_0003 CDS
T00513
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sputcn32_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spc03400
]
Sputcn32_0003
DNA repair and recombination proteins [BR:
spc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sputcn32_0003
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_13
AAA_29
AAA_16
ABC_tran
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ABP73739
UniProt:
A4Y1A6
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All DBs
Position
2850..3932
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AA seq
360 aa
AA seq
DB search
MSLTRLNIEAFRNIQFAQLIPAPGINVIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRV
INNDNDKLTLFATLNLARGDSKIGLRRFRSGETEVKIDGEKVKRLSTLAETLPIQVITPE
SFSLLFEGPKSRRQFIDWGAFHADPQFYGAWTNVRRVIKQRNQLLRNGAVYTHIQFWDQE
FVRYAEQVTEIRNHYVDSLNGLLKGIIGEFLPSVDVKVSFTRGWDSKTDFAELLENQYSR
DLATGHTVSGPHKADLRLRVGNLPAQDALSRGQLKLLVCALRIAQGKLLKQQIDKHSIYL
VDDLPSELDAQHRQLLLKQLTDTGAQVFVTAIDPAAIVDSLHTPPNRMFHVEQGRVTVVE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaacccgtcttaatattgaagcttttcgcaatattcagtttgcacagttaatt
cctgcgccagggattaacgtgatttatggccaaaatggcagcggaaaaaccagtatttta
gaagccatttatttcctcggtatggggcgttcgtttcgcagccatttatcgcagcgagtg
attaataacgacaacgataagttgactctatttgcgacgttaaacttagcgcgcggtgac
agtaaaatcggtttgcgccgatttcgtagcggtgagactgaagttaaaattgatggcgaa
aaggtcaaacggctatcgaccttagccgaaacattgcctattcaagtgatcacaccagaa
agcttttcgttactgtttgaaggcccaaaatcccgtcgacaatttatcgattggggcgca
tttcatgccgatccgcagttttatggtgcttggacgaatgttcgtcgtgttattaagcaa
agaaatcaattgcttaggaatggtgctgtttacactcatattcaattttgggaccaagag
tttgtgcgttatgccgagcaggtcaccgaaatacgaaaccattatgtagactcgttaaat
gggctacttaagggtataatcggggagtttttaccgagtgtagatgtgaaggtttcattt
actcgcggctgggatagtaagacggattttgcagaactactcgaaaaccaatattccaga
gatttggccacaggtcataccgtcagcggtccccataaagctgaccttagacttcgtgta
ggcaatttgccggcgcaggatgccctgtcccgtggtcaattgaaattattagtctgtgca
ctgcgtattgcacagggaaagttgctcaaacaacaaatagataaacacagtatttatctt
gtggatgatcttccatccgagttggatgcacagcataggcagctattgcttaagcagtta
acggataccggagcacaagtatttgtgaccgccatcgatcctgctgcaatagtcgattcg
ttacacacgcctcctaataggatgtttcatgtggaacagggacgtgtaacggtagttgaa
taa
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