Serratia proteamaculans: Spro_3775
Help
Entry
Spro_3775 CDS
T00595
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spe
Serratia proteamaculans
Pathway
spe03030
DNA replication
spe03430
Mismatch repair
spe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spro_3775
03430 Mismatch repair
Spro_3775
03440 Homologous recombination
Spro_3775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spe03032
]
Spro_3775
03400 DNA repair and recombination proteins [BR:
spe03400
]
Spro_3775
Enzymes [BR:
spe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spro_3775
DNA replication proteins [BR:
spe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spro_3775
DNA repair and recombination proteins [BR:
spe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spro_3775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABV42871
UniProt:
A8GID1
LinkDB
All DBs
Position
complement(4171962..4175450)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKIGPLVKRAAALAMPALAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFHVQSEVLGDELAQLTVLAANNEGYQNLTLLISRAYQRGYGAAGPIIDRDW
LIEHREGLILLSGARQGDVGKFLLRGNQPQVEQCLEFYQQYFPDSYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFLVADDFDAHEIRVAIHDGFTLDDPKRPRNYTSQQYM
RDEDEMCELFADIPEALLNSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDFLVLKSKEGL
EDRLEFLFPDPEVRAQRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINARRAKTGLEPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELSVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAILEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYANVPLWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGGQRLKDMHPTDRGKMTTAVGLVIASRVMVTKRGNRIGICT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARAKLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcacctgcgcgttcatagcgactactccatgattgatgga
ttagccaagatcggaccgttggtgaaaagagccgccgcgttagccatgcccgctttggca
attaccgactttaccaacctgtgtggcctggtgaagttttatggcagcgcgcacggcgcc
gggatcaaaccgatcatcggcgcggattttcatgtgcaaagtgaagtgctgggcgacgag
ctggcgcagctcaccgtactggccgccaataatgaaggttaccaaaacctgacgctgctg
atttcccgcgcctatcagcgtggttacggcgctgccggcccgatcatcgatcgtgactgg
ctgattgagcaccgtgaagggcttatcctgctctctggcgcccgtcagggcgacgtcggc
aagtttctgctgcgcggcaaccagccgcaggtggagcagtgcctggagttttatcagcag
tacttccccgacagctattatcttgaactgatccgcaccggtcggccggacgaagaaaac
tacctgcatgcagcggtagccctggcgaccgaacgtgggctgccggtagtggccaccaac
gatgtgcgttttctggtcgcggatgactttgacgcccacgagatccgcgttgccatccac
gacggtttcacgctcgatgatcccaagcgcccgcgtaactacacctcgcagcaatacatg
cgtgacgaagacgagatgtgtgagctgtttgccgacatcccggaggcgttgctcaacagc
gtagagatcgccaagcgttgtaacgtgactattcgccttggcgaatacttcctgccgcag
ttcccaaccggtgatatgactaccgaggacttcctggtccttaagtcgaaggaagggctg
gaagatcgactggagttcctgttcccggatccggaggtgcgtgcccagcgccgccctgaa
tacgacgaacgtctggatattgagctgaaagtaatcaaccagatgggcttcccgggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggacaacgacgtgccggtcgggcca
ggccgtggttctggtgccggttcactggtggcctatgcgctgaaaatcaccgatcttgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtttcgatgccc
gacttcgacgtcgacttctgcatggaaaaacgcgatctggtgattgatcacgtggcggag
atgtacggccgtgaggcggtatcccagatcattaccttcggtaccatggcggcgaaagcg
gttattcgcgacgtgggccgcgtgctgggtcacccgtatggcttcgtcgatcgtatctcc
aagctggtgccacccgatccgggtatgacgctggagaaagcctttgccgccgagccgcag
ttaccggaaatttacgaggctgatgaggaagtcaaagcgctgatcgacatggcgcgcaag
ctggaaggggtgacgcgtaacgccggtaagcacgccggtggtgttgtgatagcaccgacc
aaaatcactgacttcgcccccttgtactgcgatgcggaaggccagcatccggtaacccag
tttgacaagaacgatgtggaatacgccgggctggtgaagttcgacttcctcggtctgcgt
accctgaccatcatcgactgggcgttggcgatgatcaacgcccgccgcgcgaagaccggg
ctggaaccgatcgatatcgccgctatcccgctcgaagacaagaaaagcttcgacatgctg
cagcgttcggagaccactgcggtcttccagcttgaatcgcgcggcatgaaagacttgatc
aaacgcctgaagcccgactgcttcgaagatatgatcgccctggtggcgctgttccgccct
gggccgttgcagtccggcatggtagataactttattgaccgtaagcacggtcgtgaagag
atctcttacccggatatccagtggcagcatgagtcgctcaagccggtgctggagcctacc
tacggcatcatcctgtaccaggaacaggtaatgcagattgcccaggtgctggccggctat
tcgctgggcggcgcggacatgttgcgtcgtgcgatgggtaaaaagaacccggtcgagatg
gccaagcagcgtggcggtttcgaagatggggcaaaatcacgcggtatcgacggtgaactg
tcggtaaaaatctttgacctggtggagaaattcgccggttacggcttcaacaaatcgcac
tccgctgcctatgcgctggtgtcataccagacattgtggttgaaggcgcactatccagcc
gagtttatggcggcggtaatgaccgccgatatggacaacaccgataaggtggtaggcctg
gtggatgaatgctggcgtatggggttgaaaatcctgccgccggacatcaacagcggtcag
taccatttccacgttaacgatgaaggcgagatcgtttacggcatcggcgctatcaagggc
gtcggggaagggccgattgaagccattcttgaagcgcgcaacagtggtgagcagggctac
ttcaaagacttgttcgatctgtgtgctcgctcagatatcaaaaaactgaaccgccgcatt
ctggaaaagctgatcatgtccggggcattcgaccgccttgggccgcaccgcgccgcgctg
atgaactcattgcccgatgcgttgaaagcggccgatcagcatgccaaagccgaagcgatc
ggccaggtggacatgtttggcgtactggccgaagcgccggagcaggtggagcaatcctac
gccaacgtgcccctctggcaggagcaggtggtgctggacggtgaacgggaaacgctgggg
ttgtaccttactggccacccgatcacccagtacctgaaggaaatcgaacgctatgccggt
ggccagcgtttgaaagatatgcacccgacggatcggggcaagatgacgaccgccgttggg
ctggtgatcgcctcacgggttatggtcaccaagcggggtaatcgcatcggaatttgtacg
ctggatgaccgttcaggccgtctggaagtgatgttattcaccgatgcgttagaaaaatac
cagcatttattggaaaaagaccgtatcctgatcgccagtggacaggtcagctttgatgac
tttagcggtgggcttaaaatgactgcccgcgagctaatggacatcagtgaagcccgtgaa
aaatacgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgtcagtctttggaaccccatcgctcggggacgattccagtgcatctttac
tatcaacgggaagatgcgcgggccaagctgcgttttggcgcaacctggcgcgtgacgccc
accgaccgcttattgatagatttgcggactttggtaggtaatgagcaggtggaactggaa
tttgactaa
DBGET
integrated database retrieval system
