Solanum pennellii: 107008743
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Entry
107008743 CDS
T04130
Definition
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107008743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107008743
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
107008743
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107008743
Prokaryotic type
107008743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
107008743
NCBI-ProteinID:
XP_015063376
LinkDB
All DBs
Position
2
AA seq
320 aa
AA seq
DB search
MASSSSKTLKDLWKQPAAKRLKQVSSTENFISSALASSSSRKDCDEDPKDVVSSTPEQNS
RMEFNRSLAKSKRNLKLCSDKISKLNANGEGGGYVKLQELLIEETWLEALPGEFEKTYAG
NLCKFVEKEISGGVPIYPPLHLIFNALNTTAFDRIKAVIIGQDPYHGPGQAMGLSFSVPK
GVKVPSSLLNIYKELKQDLGCSIPIHGNLEQWAVQGVLLLNAVLTVRHHQANSHANKGWE
QFTDAIIKTISKKKEGVVFILWGNYAQAKARLVDETKHHILKSAHPSGLSANRGFFGCRH
FSQTNQLLEKMGMPPIEWQL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttcatccaaaaccctaaaggacctatggaagcaaccagcagcaaagcgt
ctaaaacaggtgtcttctaccgaaaacttcatttctagcgccttggcatcttcatcttcg
cgtaaagactgtgacgaagaccccaaagacgtagtatcctcaacgccggagcaaaattcg
agaatggagttcaaccgatcactcgcaaagtccaaaaggaacctcaaactatgttctgat
aaaatctccaaattaaacgcaaacggtgaagggggtggatacgtgaagttacaggaactg
ttgattgaggagacatggttggaagcattgccaggggaatttgagaagacctatgcaggg
aacttgtgcaaatttgtggaaaaggaaattagtggtggtgtcccaatttatcctccacta
catctgatttttaatgctcttaacactactgcatttgacaggataaaggctgtcattatt
ggacaggatccatatcatggaccaggtcaggcaatgggcctgtctttctcggtgcctaag
ggtgtgaaagtcccttctagtctgttgaatatatataaagaacttaagcaagatttgggc
tgttcaataccaattcatggaaatctggaacaatgggctgtgcagggcgttctgcttctc
aatgctgttctaacagtcaggcatcatcaggcaaattcacatgcaaataaaggctgggag
caatttacagatgctatcatcaaaacaatttctaagaagaaagaaggagttgttttcatt
ctgtggggaaactatgcccaagcaaaagccaggttagttgatgaaacaaagcaccatatt
ctcaaatcagcacacccttctggattgtctgcaaacagaggtttctttggatgccggcat
ttttcacagacaaaccaacttttggaaaagatgggaatgcctcccattgaatggcaacta
taa
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