Solanum pennellii: 107011179
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Entry
107011179 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107011179
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107011179
Enzymes [BR:
spen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107011179
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107011179
Prokaryotic type
107011179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
107011179
NCBI-ProteinID:
XP_015066054
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All DBs
Position
2:complement(58837042..58842704)
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AA seq
539 aa
AA seq
DB search
MAKSVVIPRMSLIFLRSKSISQPRTVFFPSMLNSLLLKSHSLHFFSTTSTPYPLQYEMII
SRPANPPSPTLKSRRQRFLPNSKPNDSEPLPGSELGFDDWVDRKLNSKSSSPQAEPQPEE
PNSGIMKMDKGKRKYYNKRRKRMFGGSDSEDENNRDKDNELVELKQEVVELPTLHKKEEE
LYFYDNFAYPWEKDKHYKMVYQLEKKFFPDQGFDKAFLDPGQSNENVNRSKKKSGKKENI
IEKDTDGGDGKSLIFFEEEEKSVSSETKKEAKVDVSEKKVEEFFKCLKKVPNKENGVVSA
EPFLATRSTGLPPKWDSPGGTVVLVNKPKGWTSFTVCGKLRRLTKVKKVGHAGTLDPMAT
GLLIVCVGKSTKIVDSYQGMTKGYSGIFRLGEATSTWDADSPVIQREPWEHIKDEDIKKT
AASFFGEIWQVPPMFSAIKVGGEKMYDKARRGESIELAPRRISIFEFDVKRSLDDRQNVI
FRVRCSKGTYVRSLCADFGKALGSCAHLTALRRDSIGENTADDAWEFKELEEAITKGYL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtcagtagtaattcctcgcatgtctctcatcttcctccgctccaaatccatc
tctcagccacgcaccgtcttctttccctcaatgctcaattcccttttgctcaaatcccat
tcacttcacttcttctctacaacttcaaccccatacccacttcaatacgaaatgataatc
tcccgccctgcaaacccaccttcacctaccctaaaatctcgccgacaacgcttccttccc
aattcaaaacctaacgattcagaacccttacccggttcagaacttgggttcgacgattgg
gtcgacagaaaattgaattcgaaatcttcttctccacaagccgaaccgcagcctgaagaa
cccaattcgggtattatgaaaatggataaagggaaaaggaaatattacaataagagaagg
aaaagaatgtttggtgggtcggattcagaggatgagaataacagggacaaggataatgag
cttgttgagttgaagcaggaagttgtggagctacctacactacacaagaaggaagaagag
ttgtacttttatgacaattttgcttatccttgggagaaggataagcattataagatggta
tatcaattggagaagaagttttttcctgatcagggttttgataaggcttttcttgatcct
gggcagtcaaatgagaatgtaaacaggagtaaaaagaaatcggggaagaaggaaaatata
atagaaaaagatactgatggtggggatggtaaaagtttgatctttttcgaagaggaagaa
aaaagcgtcagctctgaaactaagaaggaagctaaagttgatgtatcggaaaagaaagtg
gaagagttcttcaagtgtttgaagaaagttccaaataaggaaaatggtgttgttagtgct
gagccatttctagcgacaaggagtacagggcttcctcctaaatgggatagtccgggtggg
acagttgtattagtaaacaaaccaaaaggttggacttcttttactgtttgtggaaagttg
cgtcgcttaacaaaagtgaaaaaggttggccatgctggaacacttgatcctatggcaact
ggattattgattgtatgtgttggtaaatctacaaagatcgttgacagctatcagggtatg
actaagggctacagtgggatcttccgtttgggagaagccacctctacctgggatgcagat
tccccggttattcaacgagagccatgggagcatatcaaggatgaagacataaagaaaacg
gcagcatccttttttggagagatatggcaagtccctccgatgttctcagcaatcaaagtt
ggtggtgaaaagatgtatgataaagcaagaagaggagaaagcatcgaacttgcaccgaga
aggatttcaattttcgaatttgacgtgaagcggagtttagatgacagacagaatgtgatt
ttccgagtaagatgctcaaaaggtacctatgtccgatcactttgtgcagacttcgggaaa
gctcttggcagttgtgctcacttgacagctctgcgacgagattcaattggagagaataca
gcggatgatgcttgggaatttaaagaattggaagaggcaatcaccaaaggatatttgtaa
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