Solanum pennellii: 107012080
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Entry
107012080 CDS
T04130
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107012080
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spen04812
]
107012080
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
107012080
Microtubules and associated factors
gamma-tubulin ring complex
107012080
Cytoskeleton proteins [BR:
spen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107012080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_like
PAN2_N
Motif
Other DBs
NCBI-GeneID:
107012080
NCBI-ProteinID:
XP_015067291
LinkDB
All DBs
Position
3:complement(62647587..62654337)
Genome browser
AA seq
786 aa
AA seq
DB search
MNSTDSIKTLLATTGGDTVKLFDLTLEPRDPCILSYTTSPGFQVNSVKWNHTNLVVASAG
DDKKISLWRKNGQSLGTVPLAGTDSADNIEESISTINFSSKASRYICSGGSGQVIRIWDL
QRKRCIKWLKGHTDTISSAMYNCKDEHLASISLNGNLILHNLASGAKAAELKDPNAQVLR
VLDYSKISRHLLVTAGDDGSIHLWDTTGRSPKVSWLKQHSAPTSGISFSPTNDKIVASVG
MDKKLYTFDSGSRRPTFCIPYEAPFSSLAFTDDGFTLAAGTSSGRVVFYDVRGKPQPLTV
LRAYGNSEAVTSLCWQRAKPVIVNENNCTTEMALLGSAVEDSILMPDPLPAMMSSSLATS
MTTSGSRTTVRSGSVDSFSFPAGITGSTSGTTGLSPSEETPIRSSLWKGGSLARLHAPRN
FKDDMEVFSPLVEVQPITPSLDKLWDDQEGFKKDFDKKSSLLFPSSLRFPLPVEGGNENR
PIFDWKSSSLPKQEDASFAQLSSTPTSSRGDDSSSITPPEAWGGERLSDRLSHLRQSGNM
PSRFAISTSGPLAPGSMLSGLQDNFPATQSIGSLTSSTLSLANLRIKENPNEETILGSSE
HASSTSFSVGTKGITGQGTLDSLGSTVSLPRRFSSYAERISTTPSFSDGTLSVGSPKTKK
TGAETREELLNSLLSRSDTSSATAAGAFQAINGEIKQSQKSTLPELQQGSSFTLQLFQRT
QEETLSSLQKSIHEDMRNLHLDILRQFHMQEMETSSAMKLILENQAELMKEVQLLRRETQ
QLRQLL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaattctacagattcgattaagacccttttggctactactggtggtgacactgttaag
ctttttgacctcactttggaaccccgtgatccctgcattcttagctatactacttcccct
ggattccaagtcaattccgtcaagtggaatcacactaatttggtggtggcaagcgctgga
gatgacaagaagatatctttgtggaggaaaaatggacagagtttggggactgtaccactg
gccggcactgatagtgctgacaatatcgaggagtctatttcaacaattaactttagcagc
aaagcatcccgatacatatgttctggaggtagtggccaagttatacgaatatgggatttg
cagcggaagcgttgcatcaaatggttgaaaggtcataccgatactattagcagtgcaatg
tacaattgtaaagatgagcacttagcttctatcagtcttaatgggaatcttatacttcac
aaccttgcttctggtgcaaaggctgctgaactcaaggatccaaatgcacaggttttgaga
gtgcttgattattctaagattagcaggcatttattggtgacagctggtgatgatggatct
atccacctgtgggatacaactggtcgcagccccaaggtttcttggctaaagcagcattct
gcaccaacttctggcattagtttctcaccaacaaacgacaagattgttgctagtgttggt
atggataagaagttgtacacttttgactcagggtcaagaaggccgacattttgcattcct
tacgaggcacctttttcttcactggcatttactgatgacggattcactctggcagctgga
acaagtagtggccgggtagtattctatgacgttcgtggaaaaccacaacccttgactgtt
ttacgtgcttatggaaattctgaggctgtgacaagtctatgctggcaaagagcaaaacct
gtaattgtcaatgaaaacaattgcactacagaaatggctctcctgggcagtgctgtggag
gattcaattttgatgcctgacccacttcctgctatgatgtcatcaagcctagcaacttct
atgacaacatcaggttcgagaaccactgttcgttcaggttctgtggactcgttttctttt
ccagcaggcattacaggatctacatctgggacaacaggtttatctccatccgaggaaaca
cccatacgaagtagtttatggaaaggtggatctttggcaagattacatgctcctcgtaac
ttcaaggatgatatggaagttttttctcctcttgttgaagttcagccaattacaccttca
cttgataagttgtgggatgatcaggaaggtttcaaaaaggattttgataagaagtcatct
ttgctgtttccttcttctctaaggtttccccttccagttgagggtggcaatgagaatcgc
cccatatttgattggaaatcaagttccttgcccaaacaggaggatgcttcttttgcacag
ttgtcttctactccaacatcttctcgtggtgatgattcttcctccataactcctccagaa
gcttggggtggtgagagattatcggatagattatctcatcttcggcagtcaggaaatatg
ccttcccgttttgcaatctcgacatctggtcctcttgcaccaggatctatgttatctgga
ttacaggataattttcctgcaactcagagtatcggctctttgactagttctactctaagt
ttggctaatttgcgcataaaagaaaatccaaatgaagaaactattctaggatcttcagaa
catgcgagttccacatccttttcagttggaacaaaaggcattactgggcagggtactctt
gattctcttggttcaactgtgtccctcccacgaagattttccagttatgctgagagaata
agcaccacaccatccttcagtgatggaaccctttctgttggttctccaaaaactaagaaa
actggagctgaaacaagggaagagcttctgaatagcttgttatctaggtcggacacgtcg
tctgctacagcagctggtgctttccaagcaataaatggtgaaattaagcaatctcaaaag
tccacactgcctgaattgcagcagggaagttcctttacactccagctgttccaacgtaca
caagaagaaactctttcttcccttcaaaaatccattcacgaggatatgaggaatcttcac
ttagatatcttaagacaatttcatatgcaagagatggaaacttctagtgctatgaaattg
atactggaaaaccaagcagagctgatgaaggaggttcaattacttcgaagggaaacacag
cagcttcgacagttattatga
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