Solanum pennellii: 107021291
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Entry
107021291 CDS
T04130
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107021291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107021291
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
107021291
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
MIOS_WD40
NBCH_WD40
Aldo_ket_red
Motif
Other DBs
NCBI-GeneID:
107021291
NCBI-ProteinID:
XP_015077405
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Position
6:complement(35753613..35756130)
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AA seq
499 aa
AA seq
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MEPITQRRKSGINLPSTMSETSLRLDAFSSPPRSKRTTNLASSPMSNRSPRTISNLSSSP
SSKSASCSDRFIPCRSSSRLHTFGLVEKASPVKEGGGGNNDAYSRLLKSELFGADFSCFS
SPAGSKGCANSPMSPSKNMLRFKTENSGPNSPSVLGHTDTSLSNEVSTPPKPPRKVPKTP
HKVLDAPSLQDDFYLNLVDWSSQNILAVGLGTCVYLWTASNSRVTKLCDLGPTDSVCSVQ
WTREGSYISIGTSLGQVQVWDGTQCKKVRTFGGHQTRTGVLAWSSRILSSGSRDRNILQH
DVRVPSDFVSKFIGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLKLTEHTAA
VKAITWSPHQCGLLASGGGTADRCIRFWNTINGNQLNHIDTGSQVCNLAWSKNVNEIVST
HGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSVK
IPAAVKDTGVWSLGRTHIR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagccgataactcaaagaagaaagagtggaattaaccttccatctacaatgtcggaa
acctctcttcgtcttgatgctttttcttctcctcccagatcaaagcgaacaaccaatttg
gcttcatcgccaatgtcaaacaggtcacctcggacaatatcgaatctgtcatcatctccg
tcttctaaatctgcaagttgcagtgatagattcattccttgtagatcttcttcaaggctg
catacttttggtctggtggagaaggcgtctccggtgaaagaaggaggaggaggaaacaat
gatgcatattccaggttgttgaaatctgagctttttggagctgattttagttgtttctct
tctcctgcaggttctaagggatgtgctaattcacccatgagtcccagtaagaatatgctc
agatttaaaactgaaaattctggccctaattccccttccgttttggggcatacagatact
tccctatcaaacgaggtttctacccctcctaaaccccctaggaaagtgcctaaaacaccc
cacaaggttttggatgcaccatcacttcaagatgatttctatttgaacctagttgattgg
tcctcgcagaatatacttgctgttgggcttggaacttgtgtttatttatggacagcttca
aatagtagagtgacaaagttgtgcgacttaggaccgactgatagtgtctgctctgtccaa
tggactagggaggggtcttatatatcaatcggtacaagtcttgggcaagttcaggtttgg
gatggaactcaatgcaagaaggttagaacatttggtggacatcaaacaagaactggagtc
cttgcctggagttcgcgcatcctatcttctggtagtagagacagaaacatccttcagcat
gacgttcgtgttccaagtgactttgttagcaaatttatcggtcacaagtccgaggtatgt
ggattgaaatggtctcatgatgatcgagaacttgcgtcagggggaaatgacaatcagctg
ctagtgtggaatcagcgatctcagcaacctgttttgaagctaacggagcatactgccgct
gttaaggccattacctggtctcctcatcaatgtggccttctggcatcaggaggaggaaca
gctgatcgatgtattcgtttttggaacacaataaatggcaatcagttgaaccatattgat
acaggaagccaggtatgcaatctagcgtggagtaaaaatgtaaatgagatagttagcaca
catggttattcccaaaaccaaatcatggtgtggaagtatccatcaatgtcaaaggttgct
actctaactggccatagtctgcgtgtcctatatcttgccatgtcacctgatggccagaca
atagtaactggagcaggagatgagacactccgcttttggaatgtatttccgtcagtaaaa
attcctgcagcagtgaaggacacaggagtatggtctttaggcaggacgcacatacgttga
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