Solanum pennellii: 107023794
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Entry
107023794 CDS
T04130
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107023794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107023794
03036 Chromosome and associated proteins [BR:
spen03036
]
107023794
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
107023794
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
107023794
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
RMC1_N
WDR54
Motif
Other DBs
NCBI-GeneID:
107023794
NCBI-ProteinID:
XP_015080088
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Position
6:55642477..55645354
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AA seq
455 aa
AA seq
DB search
MDAGSLSSVSASKTKSRCPLPEQYLQKRNSRDNLDRFIPNRSAMDMDYAHYMLTEGRKGK
ENPAVDSPSREAYRKQLAETFNMNRSRILAFKNKPPTSVEAIPNDFSSSVHQQAKTAKPR
RYIPQTSERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVTVDEE
HGPVTSVKWAPDGRHIALGLNNSDVQLWDTTANRLLRTMRGGHRSRVGALDWNNHLLTTG
GMDGQIINNDVRVRWPIVDTYQGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSN
TSTEWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRSIKFWNTHTGACLNSIDTGSQV
CALLWNKNERELLSSHGFTKNQLTLWKYPSMVKTAELTGHTSRVLFMAQSPDGCTVASAA
GDETLRFWNVFGTPEVAKPAPKANPEPFAHLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcattgagttctgtctcagcaagtaagaccaaatctcgttgccctctt
ccggaacaatatctacaaaagagaaattctcgggataatttggataggttcattcctaat
cgttcggcaatggatatggactatgcacattacatgttgacagagggaaggaaaggtaag
gaaaatccagctgttgattctccctccagagaggcatacaggaagcagcttgcggaaaca
ttcaacatgaacaggtcacgaatattggcattcaagaacaagccacccacttctgttgag
gctattccgaatgacttctcatcatctgttcaccaacaggcgaagactgctaaaccccgt
cgatacattcctcagacctctgaaaggacattagatgctccagatctagtggatgactac
tatttgaatttgttagattggggcagcagcaatgttctttctattgctctaggcagcact
gtatatctgtgggatgcatctgatggtgccacttcagaattggtcactgttgatgaagag
catggtcctgtcacaagtgttaaatgggctcctgatggtagacatattgctcttggtttg
aacaattctgatgttcagctttgggatacaacggcaaatcggctgctgagaactatgaga
ggtggtcacagatcccgagttggcgctttagattggaacaatcacttattaacaactggg
ggcatggatggtcagatcataaacaatgatgtgagagtgagatggccaattgttgatacc
taccaaggacataaccaagaagtttgtggtttaaaatggtcagcctctggtcaacaatta
gctagtggtggaaatgataatctcctccatatatgggacaggtcaatggcttcttccaac
acatcaacagagtggcttcacaggcttgaagatcatacagctgctgttaaggcccttgct
tggtgtcctttccagggtaacttactagcctctggtggtggtggaggtgaccggtccatt
aagttctggaacacccatactggtgcttgcttgaactctatcgatacgggctctcaggtt
tgtgccctgctatggaacaagaacgaacgtgagctcctaagttcacatggtttcacaaag
aatcagctcactctttggaaatacccttccatggtaaagacagccgagctcactggtcac
acatccagagttctttttatggcacagagtccagatggttgcacggtggcatctgcagct
ggggatgaaactcttagattttggaatgtatttggtactcctgaagttgcaaagcctgca
ccaaaggcaaaccctgagccatttgctcaccttaaccgtattcggtga
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