Thiospirochaeta perfilievii: EW093_13565
Help
Entry
EW093_13565 CDS
T06210
Name
(GenBank) ATP-dependent RNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sper
Thiospirochaeta perfilievii
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sper03019
]
EW093_13565
Enzymes [BR:
sper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EW093_13565
Messenger RNA biogenesis [BR:
sper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EW093_13565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_19
T2SSE
ResIII
AAA_22
AAA_30
nSTAND3
Helicase_RecD
PhoH
Motif
Other DBs
NCBI-ProteinID:
QEN05695
UniProt:
A0A5C1QC65
LinkDB
All DBs
Position
complement(2937347..2939866)
Genome browser
AA seq
839 aa
AA seq
DB search
MNPKELPVYKEKERILEAVKNNQVVIVESPTGSGKTTQLPLILNEAGYTTSGVIGITQPR
RIATLSVSEYMAKQLKTTIPGYVGYKMRFDDQTVPTTALKIMTDGILLQEVKNDPLLSAY
SVIIVDEAHERSLNIDFVLGLLKSILRQRADFKVIISSATLNTQSFSDYFFNAPIISIET
KPYPVNLMYHPLKSDNTDELIRAITETVERNVINKEKGDGDFLIFLSGEKLIKDTVTALE
SSIVNKKLLVIPLYGRLSKEEQEKIFVKTPLFKTKVVVSTNIAETSVTIDGITCVLDSGL
SKLNYYNPHTFTSSLIENSISKASADQRKGRAGRTAPGTCYRFYSKKDYELKDKYTPEEI
FRTDLSEVVLRMSEIGIRDFHSFDFLSSPGKQGITGAVKTLQQFGALNSDNSLSSIGEMM
VQFPLLPRHSRMIVESILRYPNVLNEVIIATSFISTRSPYALPPGEEIDAREAHASFGDE
NGDFSAYLKLFKMFNQAVKKDKFCKRFYLDEKIMFEIVNIHEQLSSIISEMGIPISLDAP
FSFKEYIISLSAGLIQFIGAKTGRGIYRTPTTDKVIIHPGSVLFREKPDFIVAGEIVKTS
RMYARSVSPLKKQWIKDISQDLYLDLITGGIMKGSNNKRERERETHKTKKDTTNQIYLGE
YTFPIKQFRGNKYVEFNWFDIKPAVESIKWEEIPSLGNLRGELKFKNFVILKEAKVNKIF
KAVKLINPESEIIMDFPSETFHINSLEDVEKLLIPSLKYVMNLTPVSKKKKSKNELGFLS
LNTDNNGTYWFKSTKRFNTALNQSTEAISALANSSKNQVKPDSWSIINRVYSKLDSFYL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaaagaattgcccgtatataaagagaaagagagaatactagaagcagttaaa
aataatcaggttgtaattgtagagagtcctacaggatctggaaaaacaacccagctacca
cttatattaaacgaggctggttatacaacaagcggtgttattggtattacacaaccaaga
agaatagcaacactctctgtttcagagtatatggctaaacagctaaaaacaacaatcccg
ggttatgttgggtataaaatgaggtttgacgaccaaacagtcccgacaactgcacttaaa
ataatgacagatggaatacttctccaggaagtaaaaaatgacccacttttatctgcttac
agtgtaattattgtagatgaggcccatgaacgaagtctaaatattgattttgtacttggt
ctactaaagagtattttaaggcaaagagccgattttaaagttataatttcatcagcaact
ttaaatacccagagtttttctgattacttttttaatgcacctataatctctatagagact
aaaccctaccctgtaaatctaatgtatcacccactaaaaagtgacaatacagatgagcta
ataagggctataacagagacagtagagcgtaatgttattaacaaagagaagggagatgga
gattttttaatctttctatccggggaaaaacttattaaagatactgtaacagcccttgag
agttcaattgttaataaaaaactattagtaatccccctatatggtagattaagtaaggaa
gagcaggagaagatttttgttaaaactcccctgtttaaaacaaaggttgtagtatcaact
aatattgcagaaacatctgtaacaattgatggtattacctgtgtattagactctggttta
agtaaactaaattactacaacccccatacatttacatcgtccttaatagaaaactctata
tcaaaggcttcggcagaccaaagaaaaggaagggcaggaagaactgcccctggaacctgt
tatagattttactcaaaaaaagattatgaactaaaggataaatatacaccagaagagatt
tttagaactgacctatccgaagttgttttaagaatgtcagagataggaattagggatttc
cactcctttgactttttatcatcccctgggaaacagggtataacaggggctgtaaaaacc
ctacaacagtttggagcattaaatagtgataactctctaagtagtataggagagatgatg
gtacagtttcccctactacctagacactctagaatgatagtagaatcaattttaaggtac
cctaatgtattaaacgaagtaattattgcaacaagttttattagtacaagaagcccctac
gccctacctccaggggaggaaatagatgccagggaagcccatgcatcctttggagatgaa
aatggagacttctcggcctatctaaaactttttaaaatgtttaaccaagctgtaaaaaag
gataagttttgtaaaagattctatttagatgagaagataatgttcgaaattgttaatatc
cacgagcagttaagctcgattattagcgaaatgggcataccaatatccctagatgcaccc
tttagttttaaagagtatattattagtttaagtgctggtttaatacagtttataggagca
aaaaccggtagaggtatctaccgaactccaacaactgacaaggtaattatacacccagga
tccgttctttttagggagaaaccagactttattgtagcaggagaaattgtaaaaacaagc
agaatgtatgcaagaagtgtaagccccttaaaaaaacagtggattaaggatatatcccag
gatttatacctggacttaattactggtggaataatgaagggctctaataataaaagggaa
cgggagagagagacacataaaactaagaaagatactactaatcagatctatttaggtgag
tatacattcccgataaaacagtttagaggtaataagtatgtggagtttaactggtttgat
ataaaacctgcagtagagagtataaaatgggaagagattccatcccttggtaacttaaga
ggtgagttaaagttcaaaaactttgtaattctaaaagaggcaaaggttaataaaatattt
aaagctgtaaaactaataaaccctgagtctgagataataatggattttccatctgagact
tttcatataaatagcctggaggatgttgagaagttattaataccatcccttaaatatgtt
atgaatctaactcctgttagtaaaaagaaaaagagtaaaaacgagttaggctttttaagc
ctaaatacggataacaatggaacatactggtttaagtctactaagagatttaacacagca
ttaaaccagagtaccgaagcaatttcggcattggctaatagctccaaaaaccaggtaaaa
cctgatagttggagtattataaatagggtttatagtaagttagactctttttatctgtag
DBGET
integrated database retrieval system
