Sphingomonas psychrotolerans: CVN68_03050
Help
Entry
CVN68_03050 CDS
T05307
Name
(GenBank) hypothetical protein
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphc02000
]
CVN68_03050
Transporters [BR:
sphc02000
]
Other transporters
Pores ion channels [TC:
1
]
CVN68_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
ATY31086
UniProt:
A0A2K8MEY0
LinkDB
All DBs
Position
724130..729406
Genome browser
AA seq
1758 aa
AA seq
DB search
MSADYLGSSGGDGIAGNAGTGGGGGGSGGLVLTGVEVSVQTDGHAVTGGIGGRSAGSGFW
GTAGGGGAGLVLLQGGALAISGGSAIAGGLGGGRADYGGGGGAGLFLYAGGALINQAGSI
RGGNGGGEILFVYMGGDGGAGVLSNLGTIANEAVIIGGDGGVGRSMGGNGGIGVVAWGGS
IDNAANGVISGGQGATIRDAGRNNKAGGGGGGIWFRDGQAASLTNAGTVEGGAAGATPFG
DNVVGAGGVGVTGAATGNISIINSGTITGGLNSRNAVRSDAITLFGSGNRVELRAGSTIN
GNVVVSGGSDNALVLGGSANSGMDVSLVSALAQYRGFDRFEKVGASNWTLTGAGSQDWLI
TSGTLKGDTNSLSGSLGFGTSDGGRGAIFDQAFNGTYGGVLSGDGVVTKSGTGAVTMTGV
PAPGDKFTGLVQVDGGTLVLNGTLGDRAGKTAQLRVGTGAMLGGSGTFLGDVTVADGGIV
GPGTSPGTLTITGNYTLGAGSVLRYELGQPGVVGSATNDLIVVGGNLTLDGSLDLTALPD
FGAGYYRLIDYAGSLTDNGLELGTTPPGFTGTVQTGIAGQVNILFNDGAQRVQYWDGTDA
TGRSAATNGDGGMGVWRAGSTNWTAASGFGINDGWAGQAGVFAGTAGGTVTIEGRQSFQR
LRFDTAGYVLQSGALVTTGDFSIIEVNAATTINSAIAGIAGLTKTGAGALTMGGANSYTG
RTTVSAGSLSLAAGGLIAGAVHNEAYFSNAGTVNGSVTNAGAFASTGTLNGNLLNQGTAS
LAGQVRGSIENHGTVALTGALSGVTRLNQVGGSLNVAGFEIELDVLDGEGSIALGGGTLM
IGSTASSSVFDGMIAGGGTVTIAAGSFEGSGSIDATMVVVDGAHLRGVRGSTLSVGSLIL
AAGSQLDVALGAPLSAPLFDIDGNLTLDGTVNVSASPAFGAGVYRLFDYRGVLTDNGLEL
GAVAGAPGGQLSIQSGAGHVNLVNTAGVTLAFWDGGAAGFHNNGAVDGGNGTWSTGSANW
TAADGKVNSAMAPQPGFAVFQGSAGTVMIDNTAGQVSATGMQFATNGYTLEGGPLALTGE
RAVMRVGDGSAAGAGMRATVAAPLTGPATLVKSDLGTLVLTGSNSYSGGTIVEAGTLVGD
TNGLRGNIANRASLVFDLAANGTFDGSVTGTGKTMKSGAGALTLAGANASDWQVLAGSLI
TTSTLFTGDVDLKQGASLVFDQTREGAYGATITGNGSIAVRGGGAIRFTGNGSAFLGTTN
VGGGQLLTINGTLGGTLDIAAGGRLQGSGTAGSVNVAGTIAPGNSIGTLTLGGNLALTSG
SIYEVEADATGASDRIIVGGTATIGSNVGMTVLAADGNYAARTNYTVLSASGGVTGTFAA
VTSNLAFLTPTLNYSANAVTLNLRRNTVDFATVGQTHNQAGVAPAVEALGSGNRVYDAVV
ALTAPEARDAFDQLAGSDYASVRGQLLEDSRFVRDAMLARGQAAGGSGVALWGRVLGSRG
SINDNIDAPGYERDLEGLLTGFDGPLGESLRAGVAVGYGTTDIHIRRGRHEIRSYHAGGY
FMGGFGVFSFQLGGAYAWNDVEATRRIAFGTFDQILSSEYAARTFQTFGEVALRGELGGV
MLQPFASVARVSLFDARVREQGGGATLRGGDGRARVTWGNLGIRTRADLGMNDIGLRFAG
SAALRHAFGDRSANLDLAFTSGAAFNVVGAGIERDSIAVDGGLEADLTRDLALSISYMGN
YGNSSTDHGGRVSLNWQF
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcggattaccttggatcctcgggcggcgatgggatcgccggaaacgccggcacc
ggcggcggcggaggcggcagcggtgggctggtgcttacgggcgtcgaagtcagcgtgcaa
actgacgggcatgcggtgaccggcggcatcggcgggcgcagcgcgggctccggcttctgg
ggaaccgccggcggcggcggtgcaggactggtgttgctccagggcggcgcgctggcgatt
tccggcggctcggctatcgccggcggattgggcggcggtcgggccgattatggcggcggc
gggggggcgggactcttcctctatgcaggcggcgccctgatcaatcaggccgggagcatt
cggggcggaaacggcggcggggaaattctatttgtctacatggggggtgatggtggtgcc
ggcgtactcagcaatctgggcacgatcgccaacgaggcggtgatcatcggcggcgacgga
ggcgttggcaggtcaatgggcgggaatggcggcattggtgtcgtcgcgtggggcggcagc
atcgacaatgccgcgaacggcgtcatctcgggcggccaaggtgccaccatacgggatgct
ggccgaaataacaaagccggcggcggcggtggtggcatctggttccgcgatggtcaggcg
gcgagcctgaccaatgcgggtaccgtcgaaggaggggcagctggagcgactccgtttggc
gacaatgtggttggcgctggcggtgtgggcgtcacgggggccgcaaccggcaacatctcg
atcatcaattccgggacgatcaccggcgggctcaacagccggaatgcagtgcggtctgac
gcgatcacgctgttcggcagcggtaaccgtgtcgaattgcgcgcgggctcgacgatcaac
ggcaatgtcgtcgtgtcgggcgggagcgacaatgcgctggtgctcggcggttccgccaat
tccggcatggacgtgtcgctggttagcgcacttgcacaatatcgcggcttcgacaggttc
gagaaagtcggggcgagcaattggacgctgaccggggcggggagtcaggactggttgatc
acgagcggcacgctgaagggcgacaccaacagcctcagcggcagtcttggcttcgggacc
agtgacggcggtcgcggcgcgatctttgatcaggcctttaacggcacctatggcggagtt
ctctccggcgacggcgtggtgaccaaatccgggaccggtgcggtgacgatgacgggtgtc
ccggcgcccggagacaagttcaccggcctcgtgcaggttgatggcggtacgctggtgctg
aacggcacgctcggcgatcgtgcgggcaagactgcccagctccgtgtcgggactggcgcg
atgctaggcggcagcggaacattcctcggcgacgtcaccgtcgccgatggggggattgtc
ggccccggcaccagcccgggcacgctcacgatcacaggcaattacacgctcggcgcaggg
tcggtcctcagatatgagctcggccagcccggtgtggtgggaagcgcgaccaacgacctg
atcgtcgtcggtggcaatctcacgctcgacggcagtctggacctgaccgcgctcccggat
ttcggtgccggctattatcgcctgatcgattatgccggctcgctgaccgacaacgggcta
gagctgggcacgacaccgccgggcttcaccggcactgtgcaaacggggatcgcgggacag
gtcaacatcctgttcaacgatggtgcacagcgggtgcaatattgggacggcaccgacgcg
accggcagatctgcggccaccaacggcgacggcggcatgggcgtatggcgcgcgggcagc
accaattggaccgcagcgagcggcttcgggatcaatgacggctgggctgggcaggccggc
gtgttcgcgggcaccgccggcggcacggtgacgatagagggtaggcaaagcttccagcgc
ctgcgcttcgataccgctggctatgtgctgcaaagcggagcgctcgtgaccaccggcgac
ttctcgatcatcgaggtaaacgccgcgacgacgatcaactcagccatagccggtattgcc
ggtctcaccaagacgggcgcaggcgcgctgaccatgggcggcgcgaacagctacaccggc
cgcaccaccgtaagtgcaggaagcctgtctctcgctgccggtggcctgattgcgggagcg
gtgcacaacgaagcgtacttctcgaacgcaggcacagttaacggatcagtgaccaacgct
ggcgcctttgcttcgacgggcactctgaatggcaacctcctcaaccagggcactgccagt
ctcgccggccaggttcgcggcagtatcgagaaccacggcacggtcgcgcttacgggtgcg
ctgtctggcgtcactcgcctgaaccaggtgggtggcagcctgaacgtggcagggttcgag
atagagctcgacgtgctcgacggcgaaggcagcatcgctctgggcggtggaacgctgatg
atcggctcgacagcaagcagctcggtctttgacggcatgatcgccggcggcggcaccgtg
acgatcgccgccggcagctttgagggcagcggatcgattgatgcgacaatggtcgtcgtc
gatggtgcgcatctcaggggcgtgcggggcagcaccctgtcggtgggttcgctgatactc
gctgcgggatcgcagctcgatgttgcgctcggcgctcccttgagcgccccgttgttcgac
atcgacgggaacctcacgctcgacggcaccgtaaacgtgagcgccagtcccgcgttcggc
gcgggcgtctatcgcctgttcgactataggggagtgctcaccgacaatggcctcgaactg
ggtgccgtggcgggcgctccgggtggccagctctcgattcagagcggggccgggcacgtc
aacctggtcaacaccgcaggggttacgctcgcattctgggacggcggcgctgccggcttc
cacaacaatggtgcggtcgacggcggcaatggcacctggagcaccggtagcgctaactgg
accgcggcggacggcaaagtgaacagcgctatggcgccgcagccggggttcgcggtgttc
cagggaagcgccggcacggtgatgatcgacaacaccgcgggccaagtctctgcgacggga
atgcagttcgcgacgaacggctatacgctcgagggcggccctcttgcgctgacgggcgag
cgtgcggtgatgcgcgtcggcgacggcagcgcagcaggcgccggaatgcgtgcgacggtc
gcggctccgctgaccggcccggcgaccctggtcaaatcagacctgggcacgctcgttctc
accggctcaaacagctattccggcggtacgatcgtcgaagccggcaccctcgtcggcgac
accaatggactgcgtggcaacatcgccaaccgtgcgtcgctggtattcgaccttgccgcg
aacggtacattcgacggctccgtcaccgggacaggcaagacgatgaaatcgggtgcaggg
gcgctcacgcttgcaggtgcgaacgctagtgactggcaggtcctggcgggtagcctgatc
accacttctacactgttcaccggcgatgtggacctcaagcagggggcgagcctcgtgttc
gaccagacgagggagggcgcctatggcgcaacgatcaccggcaacggctcgatcgccgtg
cgtggtggtggggcgatccggtttaccggcaatggctccgctttccttgggacaaccaac
gtcggcggcgggcagctgcttaccatcaacggcacgctggggggcacgctcgacatagct
gcgggcggtcgcctgcagggcagcggaacggccggatcggtcaacgtcgcaggcacgatc
gctccaggcaattcgatcggaacgcttaccttgggcggcaatctggcgctcacgtcgggc
agcatatacgaggtggaggcggacgcgaccggcgcgagtgaccgcatcattgtcggcggc
actgcgacgatcggcagcaatgtcggcatgaccgtgctggcggcggacggcaactacgcg
gccagaaccaattatacggttctcagcgcctcggggggcgtgaccggtacgttcgctgcc
gtcacttccaatctggcctttctcaccccgacgctgaactattcggccaacgcagtgacg
ctcaaccttcgtcgcaataccgtcgacttcgccacggtaggccagacacacaatcaggca
ggcgtcgctccggctgtcgaggcgctgggttcgggcaaccgtgtgtacgacgcagtggtc
gcgctcaccgcacctgaagcacgcgacgccttcgatcagcttgcaggttcagactatgcc
agcgtccgcggtcaattgctcgaggacagccgcttcgtgcgggatgcgatgctcgcacgc
gggcaagcggccggcggctccggcgtggcactttggggccgcgttctgggcagtcggggc
agcatcaacgacaacatcgatgcgccgggctacgaacgtgatcttgaaggtttgctgacc
ggcttcgatggcccgctgggcgagagcctgcgcgcgggggtcgcggtcggttatgggaca
acggacatccatatccgccgtgggcgacatgagatccggtcctatcacgcaggcgggtat
ttcatgggaggcttcggagtgttctcattccagcttggcggcgcctatgcatggaatgat
gtcgaagccacacgccggatcgcctttggaacgttcgatcaaatattgtcatccgagtat
gctgcacgcaccttccagacgtttggcgaagtcgcgctcaggggcgaactcggcggggtc
atgctccagccatttgcgagcgtcgcgcgggtcagtctcttcgacgcacgggttcgtgag
caaggcggcggcgctacgctgcgtgggggcgacggcagggcgcgcgtcacttggggcaat
ctcgggattcgcacaagggcggacctcggcatgaacgacatcggactgcggtttgctggc
tcagcggcactccgccacgcgttcggtgatcgttccgccaatctcgatctcgcattcacc
tccggagcagcattcaacgtggtcggtgcaggaattgagcgcgacagcattgccgtcgat
ggtggtcttgaggcggatctcactcgcgatctcgctcttagcattagctacatgggcaat
tatgggaatagctctaccgaccatggcgggcgcgtgtcccttaactggcagttctag
DBGET
integrated database retrieval system