Rhizorhabdus wittichii DC-6: HY78_27725
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Entry
HY78_27725 CDS
T05200
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HY78_27725
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphd01007
]
HY78_27725
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphd03016
]
HY78_27725
03029 Mitochondrial biogenesis [BR:
sphd03029
]
HY78_27725
Enzymes [BR:
sphd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HY78_27725
Amino acid related enzymes [BR:
sphd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HY78_27725
Transfer RNA biogenesis [BR:
sphd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HY78_27725
Prokaryotic type
Other AARSs
HY78_27725
Mitochondrial biogenesis [BR:
sphd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HY78_27725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
ARR56959
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All DBs
Position
complement(5877186..5878967)
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AA seq
593 aa
AA seq
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MMHAYRTHTCGQLRAQDVGSQVRLSGWVHRKRDHGNLLFVDLRDHYGLTQIVTDIESEAF
RQLERLRVESVVTITGDVVARAGEAVNPNLATGEIEIRAREVSVQSTAQELPLPVAGEAD
YPEDIRLRYRFLDLRRDRIHANIVLRSNVIASIRRRMIDQGFTEYQTPILTASSPEGARD
FLVPSRIHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDF
EMSFVTQEDVFAAIEPVLHGVFEEFANGRAVTPAPFPRIAYRDAMLRYGSDKPDLRNPLE
ITDVTEHFQGSGFGLFARIVEGGGVVRAIPAPGAGAKSRKFFDDMNDWARAQGHAGLGYI
NIKGGEAGGPIAKNHGEEATAKLIAALGLGPDDGVFFAAGKELATAKLAGAARTRVGEEL
GLIEQGVFKFCWVVDFPMFEYDEDAKKIDFSHNPFSMPQGEMEALETMDPLDILAYQYDI
VCNGVELSSGAIRNHRPEIMYKAFEIAGYSQEQVEENFSGMLNAFKFGAPPHGGSAPGID
RIVMLLADEPNIREVVLFPMNQKAEDLMMGAPSQVSLKQLRELNIRVVEQSKQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgcctatcgcacgcacacttgcggccagctccgggcccaggacgtcgggtcc
caggtccgcctgtcgggctgggtgcatcgcaagcgcgatcatggcaacctgctgttcgtc
gacctgcgcgaccattacggcctgacgcagatcgtcaccgacatcgagtcggaggctttc
cggcagctcgagcggctgcgcgtggagtcggtcgtgacgatcaccggcgacgtcgtcgcc
cgtgccggcgaggcggtgaaccccaatctcgcgaccggcgagatcgagattcgcgcccgc
gaggtttcggtccagtcgaccgcgcaggaactgccgctgccggtggcgggcgaggccgac
tatcccgaggatatccgcctgcgctatcgcttcctcgacctgcgccgcgatcgcatccac
gccaatatcgtgctgcgttcgaacgtgatcgcctcgatccgccgccgcatgatcgaccag
ggcttcaccgagtatcagacaccgatcctgacggcgtcgtcgccggagggcgcgcgcgac
ttcctggtgccgagccgcatccatccgggcaaattctacgcgctgccgcaggcgccgcag
atgttcaagcagctgctgatggtggcgggcttcgaccgttatttccagatcgccccctgc
ttccgcgacgaggacgcccgtgccgaccgctcgccgggcgagttctaccagctcgatttc
gagatgagctttgtcacccaggaggacgtgttcgccgcgatcgagccggtgctgcacggc
gtgttcgaggaattcgccaatggccgcgcggtcaccccggcgccgttcccgcgcatcgcc
tatcgcgacgcgatgctgcgctacggctcggacaagcccgacctgcgcaacccgctggag
atcaccgacgtcaccgagcatttccagggctcgggcttcggcctgttcgcgcggatcgtc
gagggcggcggcgtcgtccgcgcgatcccggcgccgggcgcgggggcgaagagccgcaaa
ttcttcgacgacatgaacgactgggcgcgcgcccagggccatgccgggctcggctacatc
aacatcaagggcggcgaggccggcggcccgatcgccaagaatcatggcgaggaggcgacc
gcgaagctgatcgcggcgctgggcctcggccccgatgacggcgtgttcttcgcggcgggc
aaggaactggcgacggccaagctggcgggcgccgcgcgcacccgcgtcggcgaggaactg
ggcctgatcgagcagggcgtgttcaaattctgctgggtcgtcgacttcccgatgttcgaa
tatgacgaggatgcgaagaagatcgacttcagccacaaccccttctcgatgccgcagggc
gagatggaggcgctggagacgatggatccgctcgacatcctcgcctatcagtacgacatc
gtctgcaacggcgtggagctgtcgtcgggcgcgatccggaaccaccggcccgagatcatg
tacaaggcgttcgagatcgccggctacagccaggagcaggtcgaggagaatttctcgggc
atgctcaacgccttcaagttcggcgcgccgccgcacggcggatcggcccccggcatcgac
cgcatcgtcatgctgctcgccgacgagccgaacatccgcgaggtcgtgctgttcccgatg
aaccagaaggccgaggacctgatgatgggcgcgccctcgcaggtcagcctgaagcagctc
cgcgagctgaacatccgggtggtcgagcagagcaagcagtaa
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