Sphingomonas hengshuiensis: TS85_19550
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Entry
TS85_19550 CDS
T03848
Name
(GenBank) RNA polymerase sigma70
KO
K02405
RNA polymerase sigma factor FliA
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi02020
Two-component system
sphi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TS85_19550
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TS85_19550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphi03021
]
TS85_19550
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sphi02035
]
TS85_19550
Transcription machinery [BR:
sphi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TS85_19550
Bacterial motility proteins [BR:
sphi02035
]
Flagellar system
Flagellar assembly proteins
Stator
TS85_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AJP73515
UniProt:
A0A7U4JB09
LinkDB
All DBs
Position
complement(4314171..4314950)
Genome browser
AA seq
259 aa
AA seq
DB search
MNATPLRKLGPMASLAQHVPDTSPLTYARRRAPRRDAEALVRRHLPLVRRIAWHIHGSMS
AIVDVEDLIQIGLVALVEAVSGFEDRGQVTFEQYLATRLRGAMIDELRRQATLTRGAMRR
RREYQNAVAALAAASGHLPSDAEVAEKLGVTPEKLRTDYATAEALRFESIDDHYADDSPW
FMSDAPDAFDQLADRDQRDTLVAAIASLPEREAQVIQLYYVEELNLEEIGQVLGVGAARI
CQIKASAHARLKRALQRRG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaacacccctcaggaagctcggacccatggcttcattggcccaacacgtgccg
gatacctcgccgctgacctatgcccgccggcgcgcgccgcggcgcgatgcggaggcgctg
gtgcgccgccatctgccgctggtgcggcgcatcgcgtggcacatccacggatcgatgagc
gcgatcgtcgatgtcgaggacctgattcagatcgggctggtcgcgctggtcgaggcggtg
agcggcttcgaggatcgcgggcaggtgacgttcgaacaatatctggcgacgcggctgcgc
ggcgcgatgatcgacgagctgcggcgccaggcgacgctgacccggggcgcgatgcggcgg
cggcgggagtaccagaacgcagtggccgcgctggccgccgcgtcgggccatttgccgagc
gacgccgaggtcgccgagaagctgggggtgacgccggagaagctgcgcaccgactatgcg
accgcagaggcgctgcgcttcgaatcgatcgacgaccattatgccgatgattcgccctgg
ttcatgtccgacgcccccgacgccttcgaccagctcgccgaccgcgaccagcgcgacacg
ctcgttgccgcgatcgcatctctgcccgagcgcgaggcgcaggtgatccagctttattat
gtcgaggagctcaacctcgaggaaatcggccaggtcctcggcgtgggcgcggcgcgaatc
tgccagatcaaggcatcggcgcacgcccggctgaagcgcgcgctccagcggcggggttaa
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