Sphingopyxis fribergensis: SKP52_09375
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Entry
SKP52_09375 CDS
T03542
Name
(GenBank) ribonuclease T2
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphk03016
]
SKP52_09375
Enzymes [BR:
sphk01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
SKP52_09375
Transfer RNA biogenesis [BR:
sphk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SKP52_09375
Prokaryotic type
SKP52_09375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
AJA08786
UniProt:
A0A0A7PFA0
LinkDB
All DBs
Position
complement(1980148..1980825)
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AA seq
225 aa
AA seq
DB search
MVAQAQALGCNIPDRIAVPRLKQPKRGEPVRNPAITGYLLAMSWSPQHCAEVRNPKDARD
RFQCSGESGRFGWILHGLWPETDSAGYPQWCRPAKIVPQPVLRKHLCMTPSVQLLQHEWA
KHGTCMSPHPAAYFRSAELLFRAVRFPDMKKLASKPQTAGSVRRAFASVNPGVTAPMIAV
SADKQGWLDEVRFCLGPRMKPTKCQPFQSGAKDGRQIRVRATSPR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgcaggcgcaggcactggggtgcaatatcccggaccgcatcgcggtcccgcgg
ctcaaacagccgaagcgcggcgaacccgtccgtaatccggcgatcaccggctatctgtta
gccatgagctggtcgccgcagcattgcgccgaggtgcgcaatccgaaggatgcacgcgac
cgctttcaatgttcgggcgagagcggtcgtttcggttggatactccacggattgtggccg
gagacggatagcgccggctatccgcaatggtgccgcccggcaaagatcgtgccgcagccg
gtgcttcgcaaacatctgtgcatgacgccgtcggtgcagctgttgcagcacgaatgggcg
aagcatgggacgtgcatgagtccgcacccggcagcctattttcgttcggccgaactgttg
tttcgtgcggtccgctttcctgacatgaaaaagctggcgtcgaaaccgcaaacggcggga
agcgtccgccgggcctttgcgtcggtcaatccgggggtgacggcgccgatgatcgcggtg
tcggccgacaagcagggatggctggacgaagtgcggttttgcctggggccgcgcatgaag
cccaccaaatgtcagccctttcaaagcggcgcgaaagacgggcgccagatccgcgttcgg
gcaacgtccccacgttaa
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