Sphingopyxis fribergensis: SKP52_10390
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Entry
SKP52_10390 CDS
T03542
Name
(GenBank) uracil-DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SKP52_10390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_10390
Enzymes [BR:
sphk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SKP52_10390
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SKP52_10390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3054
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-ProteinID:
AJA08984
UniProt:
A0A0A7PG71
LinkDB
All DBs
Position
complement(2196547..2197236)
Genome browser
AA seq
229 aa
AA seq
DB search
MEIDSPLPGTEPPRDCPRCPRLVAFRRECQAEYPDWWNAPVYAFGDPDAWLAFAGLAPGK
HGANRTGRPFTGDYAGDLLFATLAEFGLGNGRYDARIDDGLTLEGAIIVNSVKCLPPQNK
PTPAEIANCRPFFETQLAALPKVRVVIALGRIAHNATLRAAGMRLAAFPFAHGAIHILSD
GRYLIDSYHCSRYNTNTGRLTAAMFADVFRTAIALKDQTRGPNSSTSPR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtggaaattgacagcccattgcccggaaccgagccgccacgcgactgcccccgatgtccg
cggctggtcgcgtttcggcgcgaatgccaagcggagtatcccgattggtggaacgcgccc
gtctatgccttcggcgatcccgatgcttggctggctttcgcggggctggcaccgggcaag
catggcgcgaaccggacgggccgaccgttcacgggcgactatgccggagacctcctgttt
gcgacgctcgccgaattcgggcttggcaacggccgctacgacgcgcgcatcgacgacggt
ctgacgctcgagggcgcgattatcgtcaacagcgtcaaatgcctgccgccgcagaataag
cccacgcccgccgaaatcgcgaactgccgaccttttttcgaaacgcagcttgcggccttg
ccgaaggtccgggtggtcattgcgctcgggcggatcgcgcacaatgcgacgcttagggcg
gcgggcatgcgcctcgcggcctttccatttgcccatggcgctattcatatactgtctgac
ggacggtatctcatcgatagctatcactgctcgcgctacaacacgaacactgggcggctg
accgcggctatgttcgccgacgtttttcgcaccgcgatcgcgctcaaggatcagacgagg
gggccgaattcttcgaccagcccgcggtaa
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