Sphingorhabdus lutea: LPB140_01575
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Entry
LPB140_01575 CDS
T04602
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB140_01575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_01575
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LPB140_01575
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
CcmD
Motif
Other DBs
NCBI-ProteinID:
APG63461
UniProt:
A0A1L3JE81
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Position
complement(318744..321359)
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AA seq
871 aa
AA seq
DB search
MMVQYLELKAKAQDCLLFYRMGDFFELFFDDAKNAAEALDIALTSRGAHNGDPIPMCGVP
VHSAEGYLARLIKAGFRVAIAEQTETPEQAKERGGSKALVTRDIVRYVTAGTLTEESLLD
ARSNNMIVALAFTADGMALAAADISTGYFELLEIESVDAAAQLARLGVKEVIMADGTDYD
DKLAHILPHALQHVQVTHRPAAHFSSKAGEAAIKEYYGITTLDSFGGIGRSALAAAGGLL
AYLAHVGQGKMPYLKAPYLFDDSAYMAIDQATRESLEIISTQDGQRKGSLLAEIDQSVTG
AGARLLAQDLSLPLCQMEVINLRLELVNWFYDSGILRENIRAALKQIPDMARAMGRVVSG
RASPRDLGQLRDGIGKSIMLKEQFGALDVRPKLLDQILPAFDGHGALYDILSRALIESPP
TDSSNGGYIAAGYDAALDELRNISTNARRAIAALEQKYKEATGVTSLKIKHNAVLGYFVE
VPAKHGDVLMQADSGFAHRQTMAGAVRFNSPELHEEAMQIISAGTHSIAAEAAHLEDLIA
QILTRRDAIIALADALARIDVAQSHASKAALSNWTQPILRDDIYLDIIGGRHPVVEASLK
GSKEQFVANDCGLFPEKRLWLVSGPNMGGKSTFLRQNALIILLAQAGAFVPAKSAEIGIV
DRLFSRVGASDNLARGRSTFMVEMVETAAILTQATSKSFVILDEVGRGTSTYDGLAIAWA
VVEAIHDMNQCRCLFATHYHELSRLSDRLGAMSLHHVRAKEWKGDLILLHELAEGPADRS
YGIAVASLAGLPAPVVGRAKNVLDQLEEGRVATGGIAAGLGELPLFSAALDAAEAKVDRL
REKLSDLDIDALSPREALDLLYELKQQAEQG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcaatatttggaattaaaggctaaggcgcaagattgtttattattttaccga
atgggcgatttttttgagcttttctttgatgatgcaaaaaatgcggcagaggcgctggac
attgccttaacatcacgtggggcgcataatggcgatcctatccccatgtgcggtgttccg
gtgcatagtgcagagggatatttggcacggttgataaaggcgggctttcgcgtggcgatt
gccgaacaaaccgaaacgccagagcaggcaaaagaacgcggcggttcaaaggcattggta
acgcgcgatattgtgcgatatgttaccgccggaacattgaccgaggaatctttgctggac
gcgcggtcaaataatatgattgttgctttggcatttactgctgatggcatggcattggcc
gcagcggatatttccacaggatattttgagttgttggagatagaaagtgtcgatgccgcg
gcccaattggcgcgattgggtgtgaaggaagtcatcatggccgatggcacagattatgac
gataaattggcgcatattttgccccatgccctgcaacatgtgcaggtgacccaccgtcca
gcggcccatttttccagcaaggccggagaggcggcgattaaagaatattatggcataaca
acattggacagttttggtggcattggccgttccgcattggccgcagcgggtggtttgctg
gcttatttggcgcatgtcggccaaggtaaaatgccctatttaaaggcgccatatttattt
gatgatagcgcctatatggccattgatcaggccacacgcgaaagtttggagataatcagc
acgcaggacgggcaaagaaagggcagcttgcttgccgaaattgaccaaagcgtcacgggg
gcgggcgcgcgtttattggcgcaggatttgtccctgcccctatgccagatggaggtgata
aatttacggctggaactggtcaattggttttatgatagcgggatattgcgggaaaatatc
cgcgccgcgttaaaacaaattcccgatatggcgcgggcaatggggcgtgtggtttccggc
cgggctagtccgcgtgatttgggccagttgcgcgatgggattggcaagtcaattatgttg
aaagaacaatttggcgcattggatgtgcgtcccaaattgctggaccagatattacccgcc
tttgacgggcatggcgcattatatgatattttatcccgcgccttaattgaatcccccccc
acggatagcagcaatggcggatatattgcagcgggttatgatgccgcattggatgaattg
cgcaatatttccaccaatgcgcggcgcgccattgcagcgttggagcagaaatataaagag
gcaacaggtgtcaccagcctgaaaataaaacataatgcggtgctgggttattttgtcgaa
gttccggccaaacatggcgatgtgttgatgcaggcggatagcggctttgcccaccggcaa
accatggcgggggcggttcggtttaactcccccgaattacatgaagaagcaatgcagatt
attagcgcgggcacacatagcattgccgcagaggccgcacatttggaggatttaatcgcc
caaatattgacgcggcgtgatgccattatcgcattggccgacgcattggcgcggattgat
gtggcgcaaagccatgccagcaaggcagcattaagtaattggacacagcccattttgcgc
gatgatatatatttggacattattggcgggcgacatcccgtggtggaggcatcgttaaag
ggcagcaaagaacaatttgttgccaatgattgcggcttatttcctgaaaaaagattatgg
ctggtctctgggccaaatatgggcggtaaatcaacatttttgcgccaaaatgcgctaatc
atcctattggcgcaggcgggcgcatttgtgcccgcaaaatccgcagaaattggcattgtt
gaccgattgttcagccgtgtcggtgcgtcggataatttggcgcgtggccgttccaccttc
atggtggaaatggtggaaaccgccgccattttaacgcaggcgaccagtaaaagctttgtg
attttggatgaggttgggcgcggcacatccacctatgatgggcttgccattgcatgggcg
gtggtggaggctattcatgatatgaaccaatgcagatgtttatttgcaacccattatcac
gaactttcccgtttgtccgaccgtttgggggcaatgtcgctgcaccatgtgcgggcaaag
gaatggaaaggggatcttatcctattgcatgaattggccgaaggtccggcggaccgcagc
tatggtattgcggtggcatcgcttgccggattgcccgccccggttgtgggccgcgccaaa
aatgtattggatcagttggaggaaggacgcgtcgccacgggcggtattgctgcgggcctt
ggtgaattaccgctgttcagcgcggcattggacgcggcagaggcaaaggtggaccgattg
agagaaaagctgtctgatttggatattgatgcattgtccccgcgagaggcgttggattta
ttatatgaattaaagcaacaggccgaacagggttaa
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