Sphingorhabdus lutea: LPB140_09400
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Entry
LPB140_09400 CDS
T04602
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00470
D-Amino acid metabolism
sphl00550
Peptidoglycan biosynthesis
sphl01100
Metabolic pathways
sphl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPB140_09400
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB140_09400
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LPB140_09400
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphl01011
]
LPB140_09400
Enzymes [BR:
sphl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LPB140_09400
Peptidoglycan biosynthesis and degradation proteins [BR:
sphl01011
]
Precursor biosynthesis
Amino acid ligase
LPB140_09400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
APG62969
UniProt:
A0A1L3JD08
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All DBs
Position
complement(1983976..1984896)
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AA seq
306 aa
AA seq
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MSDKPHIAVLMGGWSNERPVSLMSGNGVADALEGRGYRVTRIDMDRNVAAKISAAKPDIV
FNALHGVPGEDGSVQGMLDLMGVKYTHSGMVTSMIAIDKELTKQRLVPLGVPMPKGKVVK
SETLYSGDPLPRPYVLKPINEGSSVGVAIVTNESNYGDPISRDSKGPWQEFDELLAEPFI
KGRELTTAVMGGRALAVTELVPKSGFYDFDAKYTDGMTQHICPAIIPQEIEEYMKLLAIK
CHEGLGCKGVSRTDFRWDDELGKDGVFVLETNTQPGMTPLSLVPEQAKYVGIDYASLVEM
IIEEAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataagccccatattgcggtattgatgggcggttggtccaatgaacgtcccgtt
tctttgatgagcggtaatggcgttgctgatgcgttggagggacgcggttatcgcgttacc
cgtattgatatggaccgcaatgtggcggccaaaattagtgcggccaaacccgatattgtg
tttaatgcattgcacggtgtaccgggtgaagatggcagtgtgcagggcatgcttgacctg
atgggtgtgaaatatacgcatagcggcatggtcacatcgatgattgctattgacaaggaa
ttgacgaaacagcgtcttgtcccccttggtgtgccaatgccaaagggtaaggtggtgaaa
agtgaaaccctttattcgggcgacccattgccgcgcccctatgtgttgaaaccgataaat
gaagggtcatcggtcggcgtggcgattgtcaccaatgaaagcaattatggcgacccgata
tcgcgcgatagcaaagggccatggcaagaatttgacgaattattggccgaaccatttatt
aagggtagggagctgaccaccgccgtaatgggtggccgcgcccttgccgttaccgaatta
gtcccgaaaagcggtttttatgattttgatgccaaatatactgatggcatgacacagcat
atttgcccagcaattattcctcaagaaatagaggaatatatgaaattattggcaattaaa
tgtcatgaaggattgggatgcaagggcgtgtcacgcaccgattttcgctgggatgatgaa
ttgggcaaggacggcgtgttcgtgttggaaaccaacacacagccgggcatgacaccgctt
agccttgttccagaacaggcaaaatatgtcggcattgattatgccagcttggttgaaatg
ataatcgaggaggcagggtga
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