Sphingorhabdus lutea: LPB140_11815
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Entry
LPB140_11815 CDS
T04602
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB140_11815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_11815
Enzymes [BR:
sphl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
LPB140_11815
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB140_11815
RecFOR pathway proteins
LPB140_11815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
APG63359
UniProt:
A0A1L3JE23
LinkDB
All DBs
Position
complement(2479005..2479469)
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AA seq
154 aa
AA seq
DB search
MIIIGLDPALGTTGWGVIKRDGNRISHIANGGVTTNPKLPLASRLLDLDGQLAEILSKFR
PDYVAVEEVFVNKNPQSTLKLAQARGVVILGAARTGTPVVEYAARLVKKSIVGKGNAKKE
QISAMLNILLPGVHVAGEDAADALAVAITHAHHI
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgataatcatcgggcttgatcccgcattgggcacgaccggatggggcgtgataaagcgt
gatggcaatcgcatttcgcatattgccaatggcggggtgacgaccaatcccaaattgccg
cttgcctcgcgtttattggatttggatgggcaattggccgaaatattatcaaaattccgg
cccgattatgtcgcggtggaggaagtttttgtaaataaaaatccgcagtccacgttgaaa
ttggcacaggcacgtggcgtggttattttgggcgcggcgcgtaccggtacgcccgtggtg
gaatatgcggcgcggctggtcaaaaaatccattgtgggcaagggtaatgcgaaaaaagag
cagatttccgccatgttaaatattttattgcccggcgtgcatgtggcgggcgaggatgcg
gcggatgcgcttgccgtggcgattacacacgcgcatcatatttga
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