Sphingobacterium sp. B29: BV902_24860
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Entry
BV902_24860 CDS
T04670
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BV902_24860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_24860
Enzymes [BR:
sphn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BV902_24860
DNA repair and recombination proteins [BR:
sphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BV902_24860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
nSTAND3
Penicillinase_R
PriA-like_WH
TrmB
zinc_ribbon_15
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
APU99149
LinkDB
All DBs
Position
complement(5776044..5778527)
Genome browser
AA seq
827 aa
AA seq
DB search
MSNPQSTIFSERDTLFVDVVLPLALARTYTYRIPVDWNDRVQVGVRVIVQFGKNKIYSAV
VKSISQEAPKHYEAKYILDIIDDKPIVNLAQFKLWDWLADYYMCSLGEVMQAALPSALKL
ASETKVVSSIAADFDRSTLSDKEYLIIEALEVAGELKVNDIVKLLGQKTVFPILKQLFDK
GIVLISEEITERYKPKTKAFLRFAPDFRNEDAKRELLDSLNRAPKQQDAVLAFMQLVKKT
EEITRPMLAEASGCGNGAITALIDKGVFEIKEKVVSRFQGEDIELDANFQFNENQQRAYT
EIQESFEEKEVTLLHGVTASGKTQIYIRLIEQAIAAGKSALYLLPEIALTAQITARLKLH
FGDKLGVYHSKFNDNERAEVWHKVMKNEFQVVIGARSSVFLPFQDLGIIIVDEEHESSYK
QFDPAPRYHARDTAIYLGFLHQTKVLLGSATPSLESYYNAKAKKYGFVQLLERYGNAQLP
SIELVNIPEEGRKENMFSYFSGTLLKAIEEAVKNKEQVILFQNRRGHTTMIQCNTCGFVA
KCVNCDVSLTYHKSSNMMHCHYCGHVEPPLRVCPACGMPHIESKGFGTERVEEELEILMP
EIRIGRLDLDSTKGKYGFDKIITAFDEHEFDVLIGTQMVAKGLDFGRVSLIGVVNADTII
NFPDFRSYERSFSLFSQVAGRAGRREAGGKVIIQSYTTNHRVLEQVVNNDYEGMFMTEIT
ERKNYLYPPFYRLIRIDIKHTDFQKCYDSANRFASALRQQLGARVLGPEPPLVSRVRNNF
IQTITLKIERTNISIAKVKELIRSVLLDFEIDKTNAGVRVQVDVDPY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccacaatctacgatttttagtgaaagagatacgctgtttgttgatgtggtc
ctaccactagcattggcaagaacatatacctatcgtattccggttgactggaatgatcgt
gtgcaggtcggtgtgcgtgtcattgtgcaatttgggaagaataagatctattctgcggtt
gtgaagtcaattagtcaggaggcaccaaagcactatgaagcaaagtatattttggacatc
attgatgacaaacccatagttaatttggctcaatttaaactttgggattggctagccgat
tattacatgtgtagtttaggcgaagtcatgcaggctgcgctaccttcggcattgaagctg
gccagtgagaccaaagtcgtttcatcgattgcggcagattttgaccgttctacactttca
gataaagagtatcttatcatcgaggctttggaggtggcgggagaacttaaagtcaatgat
attgtgaaattgctgggacaaaaaacagtcttccccatattgaagcaattatttgacaaa
ggaattgttctgatttctgaagagattacagaaagatataaacccaagaccaaagcattt
ttacgttttgctcccgactttagaaatgaagatgcaaaaagagaattgttggatagctta
aaccgtgcaccaaaacaacaagatgcggtattggcatttatgcagctggtcaaaaaaacc
gaggagatcacgcggcccatgttggctgaggcctcgggctgtggtaacggtgctattacg
gctttgattgacaaaggtgtttttgaaataaaggaaaaggttgtatcccggttccagggg
gaagatatcgaactagatgccaattttcaatttaatgaaaaccagcaaagggcctatact
gaaatacaagagtcgtttgaagagaaggaagttaccctgttgcatggtgtcacagcttca
ggaaaaacacagatttatatacggcttatcgaacaagcaatcgcagcaggaaaatcagcc
ctctatctactgcctgagattgcgctgacagcacagattacggcgcgcttaaagctgcac
ttcggcgataaattgggggtgtaccactccaagtttaatgataatgaacgtgccgaggtg
tggcataaagtaatgaaaaatgaatttcaggtcgtgattggggcccgttcttcagttttt
ctgccctttcaggatttagggattatcatcgttgatgaagagcacgaaagctcctataaa
cagtttgatccagccccacgttaccatgcccgtgatacggctatttacctcggattccta
catcagaccaaagtgctattgggatcagcgacgccttctttggaaagttattataatgcc
aaggctaagaagtatggttttgtgcaactgcttgagcgttatggcaacgcacaattgcca
agtattgagttggtgaatattcccgaagagggaagaaaagaaaatatgttttcctatttt
tctggcaccttgttaaaggcaattgaagaagccgtaaaaaataaagagcaggttatatta
tttcaaaatagacgtgggcacacgacaatgatccagtgtaatacctgtggattcgttgca
aaatgtgtcaattgtgatgtcagcttaacctatcacaagagctctaatatgatgcattgc
cattattgtggtcatgtggagcctccacttcgtgtttgcccggcctgtggaatgccacat
atcgaaagtaaagggttcggtacagaaagggtagaggaagaacttgaaatcctgatgccc
gaaattcgcatcggtcggttggatctggattccacaaaaggtaaatacggtttcgacaaa
attatcacggcttttgatgagcatgaatttgatgttcttattgggacgcaaatggttgct
aaggggctcgatttcggaagagtaagcctcatcggtgttgtcaatgcagatacgatcatt
aactttccggatttccgttcgtatgaacgatctttttcgttattttcccaggtagcaggt
cgcgcaggtcggcgtgaagccggaggaaaagtgatcatccaaagctacaccacgaatcat
cgggtgttagaacaggtggtcaataacgattatgaagggatgtttatgacggaaattaca
gaacgaaaaaactatctttatcctcctttctaccggcttattcggattgatattaaacat
acggattttcagaaatgctatgattcggccaatcgatttgcctcggcgctgcgtcaacaa
ttgggtgcaagggtattggggccggagccgccattagtttcacgcgtgcggaataatttt
atccagaccattaccttgaagattgaacgcacaaatattagtattgcaaaggtcaaggaa
ttgatccgctcggttcttctggattttgaaatagataaaaccaatgctggtgtacgcgtt
caggtcgatgtagatccatattag
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