Sphingopyxis sp. 113P3: LH20_20905
Help
Entry
LH20_20905 CDS
T04069
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphp03016
]
LH20_20905
03036 Chromosome and associated proteins [BR:
sphp03036
]
LH20_20905
Transfer RNA biogenesis [BR:
sphp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LH20_20905
Prokaryotic type
LH20_20905
Chromosome and associated proteins [BR:
sphp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LH20_20905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
FAD_oxidored
Pyr_redox_2
GIDA_C_1st
AlaDh_PNT_C
Pyr_redox
NAD_binding_9
FAD_binding_2
NAD_binding_7
Pyr_redox_3
HI0933_like
DAO
Hexapep
NAD_binding_8
Hexapep_2
Motif
Other DBs
NCBI-ProteinID:
ALC14426
UniProt:
A0A0M4CYW3
LinkDB
All DBs
Position
complement(4252002..4253873)
Genome browser
AA seq
623 aa
AA seq
DB search
MQSSATFDVVVVGGGHAGTEAAAAAARLGARVALVSFDPKMIGTMSCNPAIGGLGKGHLV
REVDALDGWMARAADAAAIHYRMLNASKGSAVQGPRIQADRRLYRDAIQSLLAAESHITV
IAGEVAALELSGDEARVEGVELGDGTTIRAGAVVLATGTFLAGTMFRGEERIEGGRIGEA
GAHRLAVQLRAAKLPMGRLKTGTPPRLDGRTIDWVRLAEQPSDSAEGARWTFSTWNEGRS
VPQIFCAITRTNTQTHAIIAANLDRSPLFTGAIGAAGPRYCPSIEDKIHRFADRDGHQIF
LEPEGLGTHLVYPNGVSTSLPADVQLEMLRTIEGLETVEMVVPGYAVEYDHIDPRALDRT
LQVRALPGLWCAGQINGTTGYEEAAAQGLVAGTNAALSVQCREPLILDRSESYIGVMVDD
LVLQGVTEPYRMLTARAEYRLRLRADNAATRLTPRGIALGLVRPATAAKFEARTAAREAA
EAQLNVAAHTADYALLGIALPGDGAARRRIDLLRFHGVTMGALTTLAPELAAFDPDILSE
IAEDAHYAPYIARQEAELRALAANEAILLDIDLDYASIGGLSREMVERLTKARPETLGQA
ARIDGITPAALTAIMVHSRRRAA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagcgcaaccttcgatgtcgtcgtggtcggcggcgggcacgccgggactgag
gccgcggccgccgctgcgcgtctcggtgcgcgggtcgcgctcgtcagtttcgacccgaaa
atgatcggaaccatgtcgtgcaatccggccattggtggcctgggaaaagggcatctggtg
cgcgaagtcgatgcgctcgacggctggatggcacgcgcggcggatgctgccgcaatccat
taccggatgctcaacgcctcaaagggctcggcagttcaagggccgcggattcaggccgat
cgccggctctatcgagacgcgatccagtcccttcttgccgccgaatcccatattacggtc
atcgcgggcgaagtggcggcgctcgagctgtccggggacgaagcccgtgtcgagggtgtg
gaactgggtgacgggacgacgatcagggctggtgcggtcgttctcgccaccggcacattt
ctcgccggaacgatgtttcgcggcgaagaacggatcgagggcggccgcatcggcgaggcc
ggcgcgcaccggctcgcggtgcagctacgcgcggcgaaactgccaatgggacggctcaag
actggcacgccgccgcggcttgacgggcgcacgatagactgggtccggcttgccgagcag
ccctccgacagcgccgagggcgcgcgctggaccttttccacgtggaacgagggccgcagc
gtgccgcagattttctgcgcgatcacgcggaccaacacccagacacacgcaatcatcgcc
gcaaacctcgaccgctcgccgctgttcaccggtgcgatcggcgctgcgggaccacggtat
tgcccatcgatcgaggacaagattcaccgtttcgccgaccgcgacggtcatcagattttt
ctcgagcccgaggggctgggcacgcatctcgtatacccgaacggcgtgtcgacgtcgctc
cccgccgatgtccagcttgaaatgctgcgtacaatcgagggtctcgagacggtcgagatg
gtcgtcccaggctatgcggtcgaatatgatcatatcgacccgcgcgcgctcgaccggacg
ctccaggttcgggcgctacccgggctgtggtgcgcagggcagatcaatggcaccaccggc
tatgaagaagcagcggcgcagggtctggtcgctggtacgaatgccgcgctcagcgttcag
tgccgcgagcctctgatccttgatcgcagcgaatcctatatcggcgtgatggtcgacgac
cttgtgctgcagggcgtgacggagccctaccggatgctcactgcgcgcgccgaatatcga
ttgcggttgcgcgccgacaatgcagcaacgcgcctgacgccgcgcgggattgcgcttggt
ctggtgcgcccggcgaccgcggcgaaattcgaagcgcgcacggccgcgcgcgaagcagcc
gaagctcagctcaatgtggcggcccatacggccgattatgcgttgctcggaatcgctctg
cctggtgacggcgcggcgcggcggcggatcgatctcctgcgcttccacggggtgacgatg
ggcgcgctcacgacactggcgcccgagctcgctgcgttcgacccggatattctgtccgag
atcgccgaggatgcgcattatgcgccttatatcgcgcggcaggaggcagagctgcgtgcc
ctcgctgcaaatgaggcaatattgctcgatattgaccttgattacgcatcgatcggcggg
ctttcgcgcgagatggtcgaacgtctgacgaaagcgcgccccgaaacgctggggcaagcg
gcgcggatcgatggcattacccccgcagcgctgacggcgatcatggtacacagtcggcgg
cgcgcggcttga
DBGET
integrated database retrieval system
