Sphingopyxis sp. QXT-31: BWQ93_13790 Help Entry BWQ93_13790       CDS       T04913                                  Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism sphq  Sphingopyxis sp. QXT-31 Pathway sphq03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:sphq00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     BWQ93_13790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sphq03400]     BWQ93_13790 Enzymes [BR:sphq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      BWQ93_13790 DNA repair and recombination proteins [BR:sphq03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      BWQ93_13790 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S RNA_ligase Motif Other DBs NCBI-ProteinID:  APZ99436 UniProt:  A0A1P8WZE4 LinkDB All DBs Position 2869682..2872186 Genome browser AA seq 834 aa AA seqDB search MARADPLAQYNAKRDFKLTPEPAGKVAKGVGNRFIVQKHDATRLHYDFRLEVDGVLKSWA VTKGPSADPADKRLAVRTEDHPMSYADFEGVIPKGEYGGGSVMLWDCGTWAPIEGKSAKD IEKGHLHFTLDGERMKGEWLLVRMKPRPGEKRENWLLRKVNDAYAGGSDDLVGRQLTSVL TGRTMAEIAGDEGGEQSLKGAKGQAFAKKMQAAAAHNRKVAKAKPKGKPPKFRPLQLATL VDAVPTGNGWFHEIKYDGYRAEIAAAGDEVRVYTRNGLDWTDKFLPLVRHIAALGLPPCL IDGEIVAYGKDGNPDFSSLQAVLKRGHGAQDEGTALHFFAFDLLEESGKSLAKLGNLERK ERLEALLRDAQPPVAVADHVIGAGEKLYAAMCGAAQEGIISKRADAPYLGRRSKSWVKVK CTRRQEFVIVGWNPSAAKARPFASLLLAQHEGGTLVYKGNVGTGFDAATMAELAKKFARL ERKTAPLEVDAATARKVHWLKPDLVAEIAFAEFTASGSVRHASFLGLRSDKEAKDVTPEK RQPAPAPESDVTISSRDRIIFPEAKATKGDLADYYEAVAPLMLPHAARRPISLVRCPQGR GKKCFFQKHDSGSFGDHVHHVPIREKDGGHEDYLYVDDADGLLACVQMGTIEFHGWGSHV GALEKPDRMVFDLDPDEGLPFADVKKAATDIRRQLADIGLTSFAMLSGGKGVHVVVPLDP GHSWDAHKDFSKRFAEALSMAEPDRFIATMSKAKRKGKIFIDYLRNQRGSTAILPYSARA REGAPVAVPIGWDALAEVDKAGAWTIRDADELLERAAGADLKGWGFVSQRLPDF NT seq 2505 nt NT seq  +upstreamnt  +downstreamnt atggcgcgcgccgatcccctcgcccaatataatgccaagcgcgatttcaagctgaccccc gagcccgcgggcaaggtcgcgaagggagtcggcaaccgcttcatcgtccagaagcacgac gcgacgcggctccactatgatttccggctcgaggtcgacggggtgctcaagagctgggcg gtgaccaagggtccgagcgccgaccccgccgacaagcgcctcgcggtgcgcaccgaagac catccgatgagctacgccgatttcgaaggcgtgatccccaagggcgaatatggcggcggc agcgtaatgctgtgggactgcggcacatgggccccgatcgagggcaagagcgcgaaggac atcgaaaagggccacctccacttcaccttggacggcgaacgcatgaagggcgaatggctg ctcgtccgtatgaagccgcgccccggcgagaagcgcgagaactggctgctgcgcaaggtg aacgacgcttatgcgggcggcagcgacgatctcgtcgggcgccagctcaccagcgtcctc accggccgcaccatggccgagatcgcgggcgacgagggcggcgaacagtcgctgaagggt gccaagggccaagccttcgccaaaaagatgcaggccgccgccgcgcacaaccgcaaggtc gcgaaggccaaacccaaaggcaaacccccgaagttccgcccgctccagctcgcaacgctc gttgacgccgtacccaccggcaacggctggttccacgagatcaagtacgacggctatcgc gccgaaatcgccgcagcgggcgacgaggtgcgcgtctacacgaggaacggcctcgactgg accgacaaattcttgcccctcgtccgccatatcgccgcactgggcctgccgccctgcctg atcgacggcgagatcgtcgcctatggcaaggacggcaatcccgacttctcctcgctgcaa gccgtgctcaagcgcggccacggcgcgcaggacgagggcaccgccctccacttcttcgcc ttcgacctcctcgaagaaagcggcaagagccttgccaaactcggcaatctcgagcgcaag gaacgcctcgaagcgctgctccgcgacgctcagccccccgtcgcggtcgccgaccatgtc atcggcgcgggcgagaaactctacgccgcgatgtgcggcgccgcgcaggagggcatcatc tcgaaacgcgctgacgcgccttaccttggccgccgcagcaagagctgggtcaaggtcaaa tgcacccgccgtcaggagtttgtgatcgtcggctggaacccctccgcagcgaaggcgcgc cctttcgcctcgctcctcctcgcccagcatgagggcggcaccctcgtctacaaaggcaat gtcggcaccggcttcgacgccgcgaccatggccgagctcgcgaaaaaattcgcacggctc gaacgcaagaccgcgccgttggaggtcgacgccgcgaccgcgcgcaaggtccattggctc aaacccgatctcgtcgccgaaatcgccttcgccgaattcaccgcgagcggatcggtgcgc cacgcgagtttcctcggcttgcgcagcgacaaggaggccaaggacgtgacccccgaaaag cggcaacccgcccccgcacccgaaagcgacgtgacgatcagcagccgcgaccgcatcatc ttccccgaagccaaggcgaccaagggcgacctcgccgattattatgaagccgtcgccccg ctgatgctcccccacgccgcgcgccgcccgatcagcctcgtccgctgcccgcagggccgc ggcaagaaatgcttcttccagaagcacgacagcggctcgttcggcgaccatgttcaccat gtcccgatccgcgagaaggacggcgggcacgaggattatctctatgtcgacgacgccgac ggcctgctcgcctgcgtccagatggggacgatcgaattccacggctggggcagccacgtc ggcgcgcttgaaaagcccgaccgcatggtcttcgacctcgatcccgacgagggcctcccc tttgccgacgtgaagaaggccgcgaccgacatccgccgccagctcgccgacatcggcctc accagcttcgcgatgctatcgggcggcaagggcgtgcatgtcgtcgtcccgctcgatccg ggacacagctgggacgcgcacaaggatttctcgaagcgtttcgccgaggcgctcagcatg gccgaacccgaccgcttcatcgcgacgatgagcaaggccaagcgcaagggcaagatcttc atcgattatctgcgcaaccagcgcggcagcaccgcgatcctcccctattcggcccgcgcc cgcgaaggcgcgcccgtcgcggtcccgatcggctgggacgccctcgccgaggtcgacaag gcgggggcgtggacgatcagggacgcggacgaactgctcgagcgcgccgcgggagcggac ctaaaaggctggggcttcgtcagccagagacttcccgatttctga

DBGET integrated database retrieval system