Sphingobium sp. RAC03: BSY17_2539
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Entry
BSY17_2539 CDS
T04461
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sphr
Sphingobium sp. RAC03
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphr03021
]
BSY17_2539 (rpoH)
Transcription machinery [BR:
sphr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSY17_2539 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARA70
HTH_11
Caudo_TAP
Virulence_fact
DUF3431
Motif
Other DBs
NCBI-ProteinID:
AOF97525
UniProt:
A0A1B3MWP4
LinkDB
All DBs
Position
complement(2596405..2597319)
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AA seq
304 aa
AA seq
DB search
MANKSNVPAVPALGGEASLNRYLSEIRKFPLLTPEQEYMLAKRYEEHQDPEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEAERGFRLATYAMWWIRASIQEFI
LRSWSLVKMGTTASQKKLFFNLRRMKNNIEAFEDGDLKPEDVTKIATDLGVSEQDVVSMN
RRMAMGGDTSLNVPMREDGEGQWQDWLQDHDPLQDERVADEQERTQRHEMLEEAMTDLND
REKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGDRLGQMAR
FAAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagagcaatgtccccgcggttccggcgctgggcggtgaagccagcctcaac
cgctatctgtcggagattcgcaaatttccgctgctcacccctgagcaggaatatatgctg
gcgaaacgctatgaggagcatcaggatcctgaagcggcggcgcagctagtcacttcgcat
ctgcgcctcgtggcgaagatcgcgatgggctatcgcggctatggcctgccggtcagcgag
ctgatttccgaaggcaatatcggcctgatgcagggcgtgaagaaattcgaggccgagcgc
ggtttccgtctggcgacctacgccatgtggtggattcgcgcctcgatccaggaattcatc
ctgcgtagttggtcgctcgtgaagatgggcaccaccgcgtcgcagaagaagctgtttttc
aacctgcgccggatgaagaataatatcgaagcgttcgaggatggcgatctcaagccggaa
gacgtcaccaagatcgcgaccgaccttggcgtatccgaacaggatgtagtgtcgatgaac
cgtcgcatggcgatgggcggcgacacgtcgctcaacgtgccgatgcgcgaggatggcgag
ggtcagtggcaggactggttgcaggatcatgatccgctgcaggacgagcgtgtcgccgac
gagcaggagcggacccagcgccatgagatgctggaagaagcgatgacggaccttaacgat
cgcgagaagcatatcctggccgagcgccgtctggccgaagagcccaagacgctggaagaa
ctgagccaggtctatggcgtcagccgcgagcgggttcgtcagatcgaggtgcgggcgttc
gagaagctgcaaaaggcgatgatgcggattgcgggcgaccggctgggccagatggcgcgc
ttcgctgccgcctga
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