Sphingosinicella sp. BN140058: ETR14_06950
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Entry
ETR14_06950 CDS
T05826
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sphs
Sphingosinicella sp. BN140058
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ETR14_06950
Enzymes [BR:
sphs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
ETR14_06950
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
PQQ_2
PQQ
Motif
Other DBs
NCBI-ProteinID:
QAY76295
UniProt:
A0A4P6FJQ0
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All DBs
Position
complement(1543010..1544956)
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AA seq
648 aa
AA seq
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MAMPKVGAAAAGFALVAAGAAQGAPHGSPIIAGRQAESLDRGVVAVPAIGGAGILVSWRL
LASDAPGTGFAVYRDGHRVGDAPPQTGTNFVDAAGRAGARYTVRPVVGGKERAPSAAAAA
LASGYLSIPLQRPAQRTAPDGTAYSYDANDTSVGDLDGDGRYEIVVKWYPSIARDNAFVG
YSGETLFDAYTLDGKRLWRIDMGPNIRSGAHYTQFLVYDFDGDGRAEVVAKTADGTIDGA
GKPIGDPKADWRETGGDVDSTDRTGSTELPGGRRVAQLTGRILKGPEYLTVFDGRSGRAL
ATAPYAPPRHPDTPAPSGDQLKSLWGDSYGNRSERYLAGVAYLDGKRPSIVMGRGYYARS
TVAAWDYRGGRLVRRWLFDTSAPGNDRFAGQGNHQLSVADVDSDGRDEIVYGSMAIDDDG
KGLWSSGLRHGDTMHLSDLDPARPGLEKWGVHEEVSRNGGIGAAMLDARTGAVLWSTKAD
KDTGRGLAADIDPRHPGAEAWAANSPDLYDVTGNVIGRHPRQTNFAIWWDGDLSRELLDG
TAIFKWDFARGESVPLLEPAGVASNNGTKANPALSADILGDWREELVVRTEDSSALRIYV
TPYPTSIRLPALMQDPVYRLGVAWQNVAYNQPPHTGYFLGTGMAPRGR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccgaaggtcggtgccgcagcagccggattcgcgctcgtcgcggccggcgcc
gcccaaggggcgccgcacgggtccccgatcattgccggtcgtcaggccgagtcgctcgat
cgcggcgtcgtcgccgttcccgcgatcggcggcgcgggcatcctggtcagctggcgcctg
ctcgcaagcgatgcccccggcaccggattcgccgtgtatcgcgacgggcatcgggtcgga
gatgcgccgccccagaccggcaccaacttcgtcgatgctgcgggccgtgcgggcgcacgc
tacaccgtgcgcccagtggtcgggggcaaggagcgggcgccgagcgcggccgcggcagca
ctggccagcggctatctgtcgatcccgcttcagcgcccggcgcagcgcaccgcacccgac
ggcacggcctacagctacgacgccaacgacaccagcgtcggcgatctcgacggcgacggc
cgctacgagatcgtcgtcaaatggtatccctcgatcgccagggacaatgcctttgtcggc
tattccggcgagaccttgttcgatgcctatacgctcgacggcaaaagattgtggcggatc
gacatgggcccgaacatccgctcgggcgcgcattacacccagttcctggtctacgatttc
gacggcgacggccgcgcggaagtggtcgccaagaccgccgacggcaccattgacggcgcc
ggcaagccgatcggcgatccaaaggcggattggcgggagacgggcggcgacgtcgacagc
accgatcgcaccggctcgaccgaattgcccggcggtcgccgtgtcgcccagctcaccggc
cggatcctcaagggcccggaatatcttaccgtcttcgatggccgcagcggccgtgcgctt
gcgaccgcgccctatgcgccgccccgccatccggacacgcccgctcccagcggcgaccag
ctcaaatctctgtggggcgacagctacggcaaccgctcggaacgctatctcgccggcgtc
gcctatctggacggcaagcggccgagcatcgtcatgggccgcggctattatgcgcgctcg
accgtcgccgcctgggattatcgcggcggcaggctggtgcggcgctggctgttcgacacg
tcggcgcccggcaacgaccgcttcgccggtcagggcaaccaccagttgagcgtggccgac
gtcgattccgacggccgcgacgagatcgtctacggttcgatggcgatcgacgatgacggc
aagggcctgtggagttcgggcctgcgccacggcgacaccatgcacctgtccgatctcgat
ccggcccgtcccggcctcgagaaatggggcgttcacgaggaggtgtcgcgcaacggcggc
atcggcgcggcgatgctcgacgcgcgcaccggcgccgttttgtggtcgaccaaggcggac
aaggataccggccgcggcctcgctgccgacatcgatccgcgtcatcccggcgccgaagcc
tgggccgcgaacagccccgacctttatgacgtcacgggcaacgtgattggccgccatccg
cgccagaccaatttcgcgatctggtgggatggcgatctctcgcgcgaactgctcgacggc
accgccatcttcaaatgggatttcgcaaggggcgagagcgtgcctttgctggagccggcc
ggagtcgcgtcgaacaacggcaccaaggccaatccggcgctcagcgccgacatcctcggc
gactggcgagaggagttggtcgtccggaccgaggacagcagcgcgttgcggatctacgtc
acgccctatcccacatcgattcggctgcccgccttgatgcaggatccggtctaccgcctg
ggcgtcgcctggcagaacgtcgcctacaaccagccgccgcacaccggctatttcctcggc
accggcatggcgccgcggggccggtga
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