Uncultured Sphingopyxis sp. UC10: SPPYR_3348
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Entry
SPPYR_3348 CDS
T05531
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00020
Citrate cycle (TCA cycle)
sphu00190
Oxidative phosphorylation
sphu00650
Butanoate metabolism
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
Module
sphu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPPYR_3348 (sdhA)
00650 Butanoate metabolism
SPPYR_3348 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SPPYR_3348 (sdhA)
Enzymes [BR:
sphu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SPPYR_3348 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Thi4
DAO
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
SBV34463
UniProt:
A0A1Y5PWR7
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All DBs
Position
SPPYR:complement(3498983..3500797)
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AA seq
604 aa
AA seq
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MTDAYKIIDHIYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNSPDHWQWHMYDTVKGSDWLGDQDAIEYMVREAPNAVYELEHAGVPFSRNADGTIYQ
RPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFALDLIMEDGP
DGKVCRGVIALCMEDGSIHRFRSQAVVLATGGYGRCYFTATSAHTCTGDGGGMVLRAGLP
LQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRS
MALEIREGRGVGPHNDHIYLHLDHIDPAVLAERLPGITESGKIFAGVDLTRQPLPVVPTV
HYNMGGIPCNYHGEVVTLGKDGPDTVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGR
ATGHRLKEILTPGAAQQPLPKDSADLALARLDHFRNANGGSPTAEIRTEMQRAMSQHAAV
FRTDELMAEGKEKLTKTYNRMNDVHVTDRSLIWNTDLVETLELDNLIAQATVTMHSAFNR
KESRGAHAHEDFPNRDDANWMKHTVAWFDGWGGKGGGVRLDYRPVHEYTLSDDVDYIKPK
ARVY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcctacaagatcatcgatcatatctatgacaccgtcgtcgtcggcgccggc
gggtcgggtctgcgcgcgacgatgggcagcgccgaagcggggctcaagaccgcctgcatc
accaaggtgttcccgacgcgcagccacaccgtcgcggcgcagggcggcatcgccgcgtcg
ctcggcaacaattcgcctgaccattggcagtggcatatgtacgacaccgtcaagggctcc
gactggctcggcgaccaggacgcgatcgaatatatggtgcgcgaggcgccgaacgcggtc
tacgaactcgaacatgccggcgtgccgttcagccgcaatgccgacggcaccatctaccag
cgcccgttcggcggccatatgcagaatatgggcgaaggcccgccggtgcagcgcacctgc
gccgcggccgaccgcaccggacacgcgatgctccatgcgctctatcagcagtcgctgaaa
tatgacgcggacttcttcatcgaatatttcgcgctcgacctgatcatggaagacggcccc
gacggcaaggtgtgccgcggcgtgatcgcgctgtgcatggaggatggcagcatccaccgc
ttccgcagccaggcggtcgtgctcgcgacgggcggctatggccgctgctatttcaccgcg
acctcggcgcacacctgcaccggcgacggcggcggcatggtgctgcgcgccggcctgccc
ttgcaggacatggagttcgtccagttccacccgaccggcatctatggcgcgggcgtgctg
atcaccgaaggtgcgcgcggcgagggcggttacctcaccaacagcgagggcgagcgtttc
atggaacgctatgccccgtcggcgaaggatctcgcgtcgcgcgacgtcgtgtcgcgctcg
atggcgctcgaaatccgcgaaggccgcggcgtcggcccgcacaacgatcatatctatctg
cacctcgatcatatcgaccccgcggtgcttgccgagcgtctgccggggatcaccgagagc
ggcaagattttcgccggcgtcgacctgacgcgccagccgctgcccgtcgtgccgacggtc
cattataatatgggcggcattccctgtaactatcacggcgaagtcgtcacgctcggcaag
gacggccccgacaccgtcgtccccggcctgttcgcggtcggcgaggcggcgtgcgtctcg
gttcatggcgcgaaccgtttgggctcgaacagcctgatcgacctcgtcgtcttcggccgc
gcgaccgggcatcgcctcaaggaaatcctgacccccggcgcggcgcagcagccgctgccg
aaggacagcgccgacctcgcgctcgcgcgcctcgaccatttccgcaatgcgaacgggggt
tcgccgaccgccgaaatccgcaccgaaatgcagcgtgcgatgtcgcagcacgccgcggtg
ttccgtaccgacgagttgatggcggagggcaaggaaaagctcaccaagacctataatcgc
atgaacgacgttcatgtcaccgaccgcagcctgatctggaacaccgatctcgtcgaaacg
ctcgagctcgacaatctgatcgcgcaggcgacggtgacgatgcactcggcgttcaaccgc
aaggaaagccgcggcgcccacgcgcacgaggatttccccaaccgcgacgatgcgaactgg
atgaagcacacggtcgcctggttcgacggctggggcggcaagggcggcggcgtccgcctc
gattaccgtccggtccacgaatatacgctgtcggacgatgtcgactatatcaagccgaag
gcgcgggtttattga
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