Sphingopyxis sp. PAMC25046: E5675_06590
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Entry
E5675_06590 CDS
T06315
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00470
D-Amino acid metabolism
sphx00550
Peptidoglycan biosynthesis
sphx01100
Metabolic pathways
sphx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E5675_06590
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5675_06590
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
E5675_06590
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphx01011
]
E5675_06590
Enzymes [BR:
sphx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
E5675_06590
Peptidoglycan biosynthesis and degradation proteins [BR:
sphx01011
]
Precursor biosynthesis
Amino acid ligase
E5675_06590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Rimk_N
Motif
Other DBs
NCBI-ProteinID:
QCB54130
UniProt:
A0A4P7RSY9
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All DBs
Position
1407457..1408383
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AA seq
308 aa
AA seq
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MSRGPWHVAVLMGGWSAEREVSLMSGNGVADALESRGHKVTRIDMDRDVALRLAEAKPDV
VFNALHGVPGEDGTVQGMLDLMGLKYTHSGLVTSVIAIDKELTKQALVPHGIPMPTGTMV
DSESLFSVDPLPRPYVLKPVNEGSSVGIAIVKDDSNYGNPIARDAMGPWQTFDRLLAEPF
IKGRELTVAVLADTPLAVTELRVKSGFYDYDAKYTPGLTEHICPADVPADVAQRMKDLAL
QAHRLLGCKGASRSDFRWDDEHGLAGIFLLEVNTQPGMTPLSLVPEQARAVGVDYAELVE
RIVGEALI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggggtccgtggcatgtcgccgtcctgatggggggctggtcggccgagcgcgaa
gtgtcgctgatgagcggcaatggcgttgccgacgcgctggaatcgcgcggacacaaggtc
acgcgcatcgacatggaccgcgacgttgcgttgcggctcgccgaggcgaagcccgacgtc
gtgttcaacgcgctccacggcgtcccgggggaggacgggacggtgcagggcatgctcgac
ctgatgggccttaaatatacgcacagcgggctcgtcacctcggtgatcgcgatcgacaag
gaattgacgaaacaggcgctcgtgccgcatggtattcccatgccgacggggacgatggtc
gacagcgaaagcctcttttcagtcgaccccttgccgcgcccctatgtcctgaagcccgtc
aacgaaggctcgtcggtcgggattgcaatcgtcaaggacgacagcaattacggcaacccg
atcgcgcgcgatgcgatgggcccctggcagacgttcgaccgcctgctcgccgaacccttc
ataaagggacgcgaattgactgttgccgtgcttgccgacacgccgctcgcggtcaccgaa
ttacgcgtgaagtcgggcttctacgactatgacgccaaatatactccgggcctgaccgag
catatctgccccgccgacgtccccgccgacgtcgcgcagcggatgaaggacctcgcgctt
caggcgcaccgcctcctcggctgcaagggcgcgtcgcgttccgatttccgctgggacgac
gaacatggcctcgcgggcatcttcctgctcgaggtcaacacccagcccggcatgacgccg
ctcagcctcgtgcccgaacaggcgcgcgccgtcggcgtcgattatgccgaactcgtcgaa
cgcatcgtgggggaagcgctcatatga
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