KEGG   Sphingopyxis sp. PAMC25046: E5675_14420
Entry
E5675_14420       CDS       T06315                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sphx  Sphingopyxis sp. PAMC25046
Pathway
sphx03030  DNA replication
sphx03410  Base excision repair
sphx03420  Nucleotide excision repair
sphx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E5675_14420 (polA)
   03410 Base excision repair
    E5675_14420 (polA)
   03420 Nucleotide excision repair
    E5675_14420 (polA)
   03440 Homologous recombination
    E5675_14420 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphx03032]
    E5675_14420 (polA)
   03400 DNA repair and recombination proteins [BR:sphx03400]
    E5675_14420 (polA)
Enzymes [BR:sphx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E5675_14420 (polA)
DNA replication proteins [BR:sphx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     E5675_14420 (polA)
DNA repair and recombination proteins [BR:sphx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     E5675_14420 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E5675_14420 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5
Other DBs
NCBI-ProteinID: QCB55504
UniProt: A0A4P7RYY0
LinkDB
Position
3053015..3055825
AA seq 936 aa
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPKGVPVGAVYGYTTMLWKLAKDLHDADGPTHL
AVILDHSSQSFRNEIYDQYKANRPEPPEDLRPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYAEAAVREGWDVTIVSSDKDLMQLIREPAEGPQVDMLDTMKNVRMGLEAVNEKFGVTP
DLVGDVLALMGDSVDNVPGVRGIGPKTATKLIQEYGNLTAALDGATTMKASKLRDNLIEH
RAMAELSRILVDLKRDCPLPDALDALKLGAIPPLPLKSFLDEHGFRSLSAKLDLGGTPGG
PPTLPRASAAPAASAAGPSTPTLPPMPAIDRALYETVTTIEALDRWIEEARAAHVVAIDT
ETASLDSVTGTLVGVSMATGPGRACYIPLGHGGTDMFAEKPEQVPLADAIGRLHALFSDE
AVLKVGHNLKYDIGVLAQHGITIAPYDDTLVMSFALDAGKHQHGLDELAKLHLDHVCISF
KDVCGTGKSQISFAEVPLDRATQYAAEDAEVAWRLWKLLKLRLPIEGGTRVYEMVDRPLA
AVVEGMERAGIMVDRDYLARLSGEFANDMLRMEGEIHGLAGQPFAIGSPKQLGEILFDKM
GLKGGRKGKSGDWSTDQSELERLERDGVPIARKILEWRQLAKLKSTYTDALQQQINPTTG
RVHTSYSLVGAQTGRLSSTDPNLQNIPIRTETGRQIRDAFIAAPGHVLIAADYSQIELRL
AAHMADVPELKTAFAQGQDIHAATAIELFGEVNRDTRGKAKTVNFSILYGISRWGLAGRL
EVTPDEAQALIARYFERFPGISDYITDTLENARAKGYTETLFGRKTWFPRIKAANQNERA
GSERAAINAPIQGTSADLIKRAMARMPNALADAGLSDVRMLLQVHDELVFEAPEDKAAAA
GDVIRAVMSGAAEPALELSVPLEVEVGTGKSWGEAH
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgtccgagaagaatcatctctatctggtcgatggctccagctacatcttccgcgcctat
caccgcctgccgccgctgacgaaccccaagggcgtgcccgtcggcgcggtctatggctat
acgacgatgctgtggaagctcgcgaaggatctgcacgacgccgacgggccgacgcacctc
gccgtcatcctcgatcattcgagccagtcgttccgcaacgagatttacgaccaatataag
gcgaaccgccccgagccgcccgaggatctgcgcccgcaattcccgctgatccgcgacgcg
acgcgcgccttctcgctgccgtgcattgagatggagggtttcgaggccgacgacctcatc
gcctcttatgccgaagccgcggtgcgcgagggctgggacgttacgatcgtgtcgtcggac
aaggatttgatgcagctgatccgcgaacccgccgaaggcccgcaggtcgacatgctcgac
acgatgaagaatgtccggatgggtttggaagcggtgaacgagaagttcggcgtcaccccc
gatctggtcggcgacgtgcttgcgctgatgggcgacagcgtcgacaatgttcccggcgta
cgcggcatcggcccgaagaccgcgaccaagctgatccaggaatatggcaatctgaccgcc
gcgctcgacggggcgacgacgatgaaggcgtcgaagctgcgcgacaatctgatcgagcat
cgcgcaatggccgaattgtcgcgtatcctcgtcgacctcaagcgcgattgcccgctgccc
gacgcgctcgacgcattgaagctcggcgcgatcccgccgctgccgctgaaaagcttcctc
gacgagcatggtttccgttcgctttcggccaagctcgacctcggcggcacgccgggcgga
ccgccgaccctgccgcgcgcgagcgcagcgccggcggcatccgcagcgggcccatcgacc
cctaccctgcccccgatgcccgccatcgaccgcgccctctatgaaacggtaacgacgatc
gaggcgctcgaccgctggatcgaggaagcgcgcgccgcgcatgtcgtcgcgatcgacacc
gaaacggcgagcctcgacagcgtcaccggcacgctcgtcggcgtcagtatggcgaccggc
ccggggcgcgcctgctacatcccgctcggccatggcggaaccgacatgttcgccgaaaag
cccgagcaggtaccgctcgccgacgcgatcggccggctgcatgcgcttttttcggatgaa
gcggtgctgaaggtcgggcacaacctcaaatatgacatcggcgtgctcgcgcagcacggc
atcaccatcgcgccttatgacgatacgctggtgatgagcttcgcgctcgacgcgggcaag
catcagcacgggctcgacgagctggcgaagctgcacctcgaccatgtctgcatctcgttc
aaggacgtgtgcggcacgggcaagtcgcagatcagcttcgccgaagtgccgctcgaccgc
gcgacgcaatatgcggccgaggatgccgaggtcgcgtggcggttgtggaagctgctcaag
ctccgcctgccgatcgagggcggcacgcgcgtctatgaaatggtcgaccgtccgctcgcc
gccgtcgtcgagggcatggagcgtgccggcatcatggtcgaccgcgactatctcgcgcgc
ctgtcgggcgagttcgcgaacgacatgctgcgcatggaaggcgagattcacggactcgcg
ggacagcccttcgcgattggcagccccaagcagctcggcgaaatattgttcgacaagatg
ggcctgaaaggcggacgcaagggaaagtcgggcgactggtcgaccgaccagagcgagctc
gaacggctcgaacgcgacggcgtaccgatcgcgcgcaaaatcctcgaatggcgccagctc
gcgaagctcaagtcgacctataccgacgcgctgcagcagcagatcaatccgacgaccggc
cgcgtccacaccagctacagcctcgtcggcgcgcagaccgggcggctgtcgtcgaccgac
cccaatctccagaacatcccgatccgcaccgagaccggccgccagatccgcgacgccttc
atcgcggcgcccggtcatgtcctgatcgccgccgattatagccagatcgagctgaggcta
gcggcgcatatggccgacgtccccgaactcaagaccgccttcgcgcaggggcaggacatc
cacgccgcgaccgcgatcgagctgttcggcgaggtcaaccgtgacacgcgcggcaaggca
aagacggtcaatttctcgatcctctacggcatttcgcgctggggcctcgcgggccggctc
gaagtgacgcccgacgaggcgcaggcgctgatcgcgcgctatttcgagcgtttccccggc
atttcggactatatcaccgacacgctcgagaatgcgcgcgccaagggttataccgaaact
ttgttcgggcggaaaacctggttcccgcgtattaaggccgcgaaccagaacgaacgcgca
ggcagcgaacgcgccgcgatcaacgcgccgatccagggtaccagcgccgacctgatcaaa
cgcgcgatggcacggatgccgaatgcgttagcggatgcggggctttccgacgtccgcatg
ctgctgcaggttcacgacgagctggtgttcgaagcacccgaggacaaggcggcggcggcg
ggcgacgtcatccgcgcggtgatgtcgggcgccgccgaaccggcgctcgagctgtcggtt
ccgctggaggtcgaggtcggcacggggaagagctggggcgaagcgcattga

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