Sphingopyxis sp. PAMC25046: E5675_20225
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Entry
E5675_20225 CDS
T06315
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5675_20225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_20225
Enzymes [BR:
sphx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5675_20225
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5675_20225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
AAA_30
zinc-ribbons_6
ETF
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QCB56535
UniProt:
A0A4P7S123
LinkDB
All DBs
Position
complement(4276096..4278264)
Genome browser
AA seq
722 aa
AA seq
DB search
MTRARVLLLTAALGPLDYRVPQGSEAPLGSVVVAPLGPRRMGGVVWEDESFGAPEPVGDN
RLRNLYEIVPVPPIAAPLRRLIEWTSDYYLSPPGSVLRMVLPGAAFADARRPIVEYRATG
ELPGRMTPQRTVALEKIGTRQGLVRELAALAEVSEAVIRGLVNTGALEAVSMSADQPYPE
PDPAFAPPDLSGEQAAAAGQLRDAVAAAKFETLLLDGVTGSGKTEVYMEAIAAAIAAGRQ
ALVLLPEIALTEPMLTRFAARFGCEPVAWHSGLRSTERRRAWHSIAAGEAKIIVGARSAL
FLPYARLGVIVVDEAHETSFKQEDGVHYHARDVAVMRGHFEGLPVVLASATPALESLAMV
EAGRYRHIKLPARFGGATLPDLAAIDMRQDPPDRGRWLAPPLVDALADRLQKGEQSLLFL
NRRGFAPLTLCRTCGHRIQCPNCTAWMVEHRLVHRLACHHCGHVMPPPRLCPECEDEDSL
VACGPGVERVADEVALRFPEARTAIVTSDTLWSPAKAAEFVDNVEGGLVDIIIGTQLVTK
GYHFPNLTLVGVVDADLGLDGGDLRAAERTFQQIAQVAGRAGRGVKPGEVLIQTRVPEAP
VMAALVANDRDGFYAAEAAARKFAGAPPYGRFAALVISSEDIEVARGQAQRLGQKAPVAD
GLAVYGPAPAPLAMLRGRHRFRLLLHAPRSFDLQGTIREWVSSVEWSSKARLAIDIDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgctcgcgtcctccttttgaccgccgctctcggcccgctcgactatcgcgtc
ccgcagggaagcgaggcgcctttgggcagcgtcgtcgtcgcgccgctcgggccgcggcgg
atgggcggcgtggtgtgggaggacgaaagcttcggcgctcccgaacccgtcggcgacaat
cgcctgcgcaatctttacgagatcgtgcccgtgccgccgatcgccgctccgctccgccgc
ctgatcgaatggacgagcgactattatctcagccccccggggtcggtgctgcgcatggtg
ctgcccggcgccgccttcgccgacgcgcgccgcccgatcgtcgaatatcgcgcgaccggc
gagctgcccggccggatgacgccgcagcggaccgtcgcgctcgaaaagatcgggacgcgc
caagggctggtgcgcgaactcgcggcgctcgcggaggtcagcgaggcggtgatccgcggg
ctcgtcaataccggcgcgctcgaagccgtcagcatgtcggccgaccagccctatcccgaa
cccgatcccgcctttgcgccgcccgatctgtcgggcgagcaggccgccgccgcggggcag
cttcgcgacgcggtcgccgccgcgaagttcgagacgttgctgctcgacggtgtcaccgga
tcgggcaagaccgaagtctatatggaagcgatcgccgccgcgatcgccgcgggcaggcag
gcgctcgtcctcctccccgaaatcgcgctcaccgaaccgatgctgacgcgcttcgccgcg
cgcttcggctgcgagcccgtcgcgtggcactcggggctgcgttccaccgagcgccgccgc
gcctggcacagcatcgcggcgggcgaggcgaagattatcgtcggcgcgcgctcggccttg
ttcctgccctacgccaggctcggcgtgatcgtcgtcgacgaagcgcatgagacgagcttc
aagcaggaggacggcgtccattatcacgcgcgcgacgtcgcggtgatgcgcggacatttc
gaggggctgccggtggtgctcgcgagcgcgacccccgcgctcgaaagcctcgcgatggtc
gaggcggggcgttatcgccacatcaagctccccgcgcgcttcggcggcgcgaccctgccc
gatttggcggcgatcgacatgcggcaagacccgcccgaccgcggccgctggctcgcgccg
ccgctcgtcgacgcgctcgccgaccgcttgcaaaagggcgagcagagcctgctcttcctc
aaccggcgcggcttcgctccgctgacgctctgccgcacctgcggccaccgcatccagtgc
cccaattgcactgcgtggatggtcgaacaccgcctcgtccaccgcctcgcctgccaccat
tgcggccatgtcatgccgccgccgcggctctgccccgaatgcgaggatgaggacagcctc
gtcgcctgcggccccggcgtcgaacgcgtcgccgacgaggtcgccctgcgctttcccgaa
gccagaaccgccatcgtcaccagcgacaccttgtggtcgcccgccaaggccgccgagttc
gtcgacaatgtcgagggcgggctggtcgacatcatcatcgggacgcagctcgtcaccaag
ggctatcattttcccaacctcacactcgtcggggtggtcgacgccgacctcgggctcgac
ggcggcgacctccgcgccgccgagcgcacctttcagcagatcgcgcaggtcgcggggcgc
gcggggcgcggggtgaagcccggcgaagtgctaatccagacgcgcgtgccggaggcgccg
gtgatggcggcgctcgtcgcgaacgaccgcgacggtttctatgccgccgaggccgcggcg
cgcaaattcgcgggcgcgccgccctatggccgctttgccgcgctcgtcatctcgtcggag
gatatcgaagtcgcgcgcggacaggcgcagcggctggggcaaaaggcgcccgtcgccgac
gggctcgccgtctatggccccgcgccggcgccgctcgcgatgctgcgcggccgccaccgc
tttcgcctcctcctccacgcgccgcgcagcttcgacctgcaggggacgatccgcgagtgg
gtgagcagcgtcgaatggtcttcgaaggcgcggctcgcgatcgacatcgacccctacagt
tttgtctag
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