Sphingorhabdus sp. YGSMI21: CHN51_15660
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Entry
CHN51_15660 CDS
T05308
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphy03021
]
CHN51_15660 (rpoH)
Transcription machinery [BR:
sphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHN51_15660 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ATW04810
UniProt:
A0A2D3RGH4
LinkDB
All DBs
Position
3267195..3268106
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AA seq
303 aa
AA seq
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MANGSNVPAKIPALGGDASLNRYLSEVRKFPILTPEQEYMLAKRYSEHKDQEAAAQLVTS
HLRLVAKIAMGFRGYGLPVSDLISEGNVGLMQGVKKFEPDRGFRLATYAMWWIRASIQEY
VLRSWSLVKMGTTAAQKKLFFNLRRMKNNLDAFEDGDLSPEDVQKISTDLGVAEHEVVNM
NRRMSMGGDASLNVSLSSEDGDGGQWQDILEDDGPLHDESIAAAQEADFRHEMLTEAMGS
LNEREQHILAERRLSEDPKTLEDLSKVYEVSRERIRQIEVRAFEKLQKAMLRIAGEKQLL
AAS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctaatggtagcaatgttccggccaagatcccagccttagggggggatgcaagcctg
aaccgatatctttcggaagttcgcaaatttccgatattgactcccgaacaggaatatatg
ctggcgaaacgctattctgagcacaaggatcaggaagcagcagcccagctcgtcacctcg
catctgcgactcgttgccaagattgcaatgggcttccgcggctacggcttgcccgtgtcg
gatctgatttccgaaggcaatgtcggcctgatgcagggcgtgaagaaattcgaacccgat
cgcggtttccgcctcgcaacctatgcgatgtggtggatccgtgcatccattcaggaatat
gtgctgcgcagctggagcctcgttaaaatgggcacgaccgcggcccagaagaaactgttc
ttcaacctgcgccggatgaagaataatctggatgcgtttgaagacggggatctgtcaccg
gaagacgtgcagaaaatctccaccgatcttggcgtcgcggagcatgaggtggtcaatatg
aaccgccgcatgtcgatgggcggcgatgcgtcgctcaacgtctccctgtcgtccgaggac
ggcgatggcggccagtggcaggacattttagaagacgacggcccgctgcacgatgaatcg
atcgctgccgcacaggaagccgatttccgtcacgaaatgctgaccgaagccatgggttcg
ctgaacgagcgcgagcagcatattttggctgaacgccgcttgtcggaagatcccaagacg
ttggaagacctgagcaaggtctatgaagtgagccgcgagcgcattcgtcagatcgaagtt
cgcgcgttcgaaaaactgcaaaaggcgatgctccgtatcgccggagaaaagcagcttctg
gcagcgagttga
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