Spirosoma aureum: G8759_06755
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Entry
G8759_06755 CDS
T06520
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
spib
Spirosoma aureum
Pathway
spib00540
Lipopolysaccharide biosynthesis
spib01100
Metabolic pathways
spib01250
Biosynthesis of nucleotide sugars
Module
spib_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
spib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
G8759_06755 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spib01005
]
G8759_06755 (rfaD)
Enzymes [BR:
spib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
G8759_06755 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
spib01005
]
Core region
G8759_06755 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QIP12346
UniProt:
A0A6G9AJ53
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Position
complement(1673414..1674379)
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AA seq
321 aa
AA seq
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MIIVTGAAGFIGSCLISKLNQENFNFIIAVDDFSDPRKEANLTGKRIQERVDREEFFGWL
DNNYQEVEFIFHIGARTDTTEFDRQIFEHLNVEYSKQIWNRCIDYQIPLVYASSAATYGM
GEFGYDDNESIIPQLKPLNPYGDSKNEFDIWALEQERKPFFWAGLKFFNVYGPNEYHKDR
MASVIYHAYNQICQSGHMRLFRSHNPDYTDGGQMRDFIYVKDVIEVCSFLMHHRRNSGIY
NLGSGKARTFLDLATLTFRAMDRDPQIEFIDTPVDIRDKYQYFTQANMAKLRSIGYDRPF
HSLEEGVSDYVKKYLKEGKYL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattattgttacgggggccgctggctttatcggaagctgtttgatcagcaaattgaat
caggaaaatttcaattttatcattgctgtcgatgatttttcggaccctcgtaaagaagca
aatctgactgggaaacggattcaggaacgcgttgaccgggaagagtttttcggctggctc
gacaacaattatcaggaggtggaatttatttttcacatcggtgcccgcaccgataccacc
gaatttgaccgccagatttttgagcatctgaacgttgagtattccaagcaaatctggaat
cgctgtattgattatcagattcccctcgtatatgcgtcatcggcagcaacttatggtatg
ggcgagtttgggtatgatgataatgagtcgatcattccgcagttgaagccgctcaatccg
tacggtgattcaaagaatgaatttgatatctgggcactggagcaggaacgtaaacccttt
ttctgggctggactgaaatttttcaacgtctacgggcccaatgaatatcataaagaccgt
atggcatcggtaatttaccatgcctacaaccagatttgccaatccggtcacatgaggctg
ttccggtcacataaccctgattataccgacggtggacagatgcgtgatttcatttacgtg
aaagacgtaatcgaagtttgttcatttctgatgcatcaccgacgcaattcaggtatctac
aacctcggaagtggcaaagcccgtacattcctcgatctggcgacacttactttccgggct
atggatcgcgatccgcagatcgagtttatcgatacccccgtcgatatccgcgataaatac
cagtattttacgcaggccaacatggctaagcttcgttctattggttatgacaggccattc
cattcgctcgaagaaggcgtttctgattacgtaaaaaaatacctcaaagaaggaaagtat
ctctag
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