KEGG   Sphingomonas piscis: G7077_04935
Entry
G7077_04935       CDS       T07460                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
spii  Sphingomonas piscis
Pathway
spii03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:spii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G7077_04935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spii03400]
    G7077_04935
DNA repair and recombination proteins [BR:spii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G7077_04935
SSDB
Motif
Pfam: Ku HC2 DUF6269
Other DBs
NCBI-ProteinID: QIK78345
UniProt: A0A6G7YNM1
LinkDB
Position
complement(1003582..1004496)
AA seq 304 aa
MAARPIWRGQIRLALVSIPVEVYSATRSGASIQFHQIHEPSGKRIKYEKVVPGIGPINTD
EIIKGFEVSKGEYVLLEPEEIESVKLESRKTLDLAQFVDVNEIDALYYEKPYFVVPADDL
AEEAFIVLRDALRAQRKVGIGQLAMRGQEYVVALKPCGRGMLLETLRYADELNKASSYFR
EIGDAEPDPDLLDLASTLIDKKTAKFDASEFHNRYVDALKGLIEEKRKKKGELVIQDPDD
GKAPKGSNVIDLMAALKKSLGDDKGGGANENKGAAKKAPAKKASARTAAAKKAPAKKTAE
RKRA
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcagcgcgaccgatatggcggggacagatcaggctggcgctcgtctcgatcccggtc
gaggtctattctgcgacccgcagcggcgcctccatccagttccaccagatccacgagcca
tccggcaagcgcatcaaatatgagaaggtcgtgcccggcatcgggccgatcaacacggac
gagatcatcaagggctttgaggtgtcgaagggcgaatatgtcctcctcgaacccgaagag
attgaaagcgtgaagctggagagccgcaagacgctcgatctcgcccagttcgtggacgtc
aacgagatcgatgcgctctattacgaaaagccctatttcgtggtgccggccgacgatctc
gccgaggaagcgttcattgtcctccgggacgcactccgcgcccagcggaaggtcggcatc
ggccagcttgccatgcgcgggcaggaatatgtcgtcgcgctgaagccctgtgggcgcggt
atgctgttggagacgcttcgctacgcggatgagctcaacaaggcctcgagctatttccgc
gagatcggcgatgccgagcccgacccggatctcctcgatctcgcttcgacgctgatcgac
aagaagacggcgaagttcgacgccagcgaattccacaaccgctacgtcgacgcgctgaag
ggcctgatcgaggaaaagcgcaaaaagaagggcgagctggtcatccaggacccggacgac
ggcaaggcgcccaagggcagcaacgtcatcgacttaatggcggcactgaagaagagcctg
ggcgatgataagggcggcggcgcaaacgaaaataaaggcgcggccaagaaggctcctgcc
aagaaggcgtcggcacggaccgccgcggctaagaaggcgccggccaagaaaacggcggaa
cgtaagcgggcttga

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