Sphingomonas piscis: G7077_04935
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Entry
G7077_04935 CDS
T07460
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spii
Sphingomonas piscis
Pathway
spii03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
G7077_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spii03400
]
G7077_04935
DNA repair and recombination proteins [BR:
spii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
G7077_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
DUF6269
Motif
Other DBs
NCBI-ProteinID:
QIK78345
UniProt:
A0A6G7YNM1
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All DBs
Position
complement(1003582..1004496)
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AA seq
304 aa
AA seq
DB search
MAARPIWRGQIRLALVSIPVEVYSATRSGASIQFHQIHEPSGKRIKYEKVVPGIGPINTD
EIIKGFEVSKGEYVLLEPEEIESVKLESRKTLDLAQFVDVNEIDALYYEKPYFVVPADDL
AEEAFIVLRDALRAQRKVGIGQLAMRGQEYVVALKPCGRGMLLETLRYADELNKASSYFR
EIGDAEPDPDLLDLASTLIDKKTAKFDASEFHNRYVDALKGLIEEKRKKKGELVIQDPDD
GKAPKGSNVIDLMAALKKSLGDDKGGGANENKGAAKKAPAKKASARTAAAKKAPAKKTAE
RKRA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcgaccgatatggcggggacagatcaggctggcgctcgtctcgatcccggtc
gaggtctattctgcgacccgcagcggcgcctccatccagttccaccagatccacgagcca
tccggcaagcgcatcaaatatgagaaggtcgtgcccggcatcgggccgatcaacacggac
gagatcatcaagggctttgaggtgtcgaagggcgaatatgtcctcctcgaacccgaagag
attgaaagcgtgaagctggagagccgcaagacgctcgatctcgcccagttcgtggacgtc
aacgagatcgatgcgctctattacgaaaagccctatttcgtggtgccggccgacgatctc
gccgaggaagcgttcattgtcctccgggacgcactccgcgcccagcggaaggtcggcatc
ggccagcttgccatgcgcgggcaggaatatgtcgtcgcgctgaagccctgtgggcgcggt
atgctgttggagacgcttcgctacgcggatgagctcaacaaggcctcgagctatttccgc
gagatcggcgatgccgagcccgacccggatctcctcgatctcgcttcgacgctgatcgac
aagaagacggcgaagttcgacgccagcgaattccacaaccgctacgtcgacgcgctgaag
ggcctgatcgaggaaaagcgcaaaaagaagggcgagctggtcatccaggacccggacgac
ggcaaggcgcccaagggcagcaacgtcatcgacttaatggcggcactgaagaagagcctg
ggcgatgataagggcggcggcgcaaacgaaaataaaggcgcggccaagaaggctcctgcc
aagaaggcgtcggcacggaccgccgcggctaagaaggcgccggccaagaaaacggcggaa
cgtaagcgggcttga
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