Stylophora pistillata (Smooth Cauliflower Coral): 111334485
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Entry
111334485 CDS
T05774
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111334485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spis03041
]
111334485
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111334485
Spliceosome [BR:
spis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111334485
Complex C
U4/U6.U5 tri-SnRNP related factors
111334485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
AAA_22
HA2_C
AAA_19
T2SSE
nSTAND3
AAA_30
ResIII
TsaE
Flavi_DEAD
SRP54
Motif
Other DBs
NCBI-GeneID:
111334485
NCBI-ProteinID:
XP_022795973
EnsemblRapid:
LOC111334485
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MGKDQAFEEAAKRLKMDEEDRKKMVPDLRKKSRRDYVKKRRVDKLEMLKEDILDDEYLFE
DAQISKREKQDQEYKKKVYHLAVEHAKAGELEKVQRYEMPQENQKPARYDETTVEELGPN
YEQKKWEEDKLGYAVMKFIAKDAWDKNKNKDYDLVVDEDQINFVMAEQIPGIKERQEPEM
NDYQKKRLTIEEVAKSLSIXPYRESLIQAIRDHQVIIIEGETGSGKTTQIPQYLHEAGFT
KGKMKIGCTQPRRVAAMSVAARVSEEMGTKLGNEVGYSIRFEDCCSERTIIKYMTDGMLL
REFLGEPDLAGYSVLIIDEAHERTLHTDVLFGLVKDIARFRKDLKLLISSATLDADKFSQ
FFEDAPIFRIPGRRFPVNIYYTKSPEADYLEATVVTVLQIHVTQPPGDILVFFTGXEEIE
RSQELLQERTRQLGSKINELTILPIYSNLPSDLQAKIFEPTPPGGRKVVLATNIAETSLT
IDGIIYVIDPGFCKQKSYNPRTGMESLVVTPISKASANQRAGRAGRVAAGNCFRLYTAWA
YKNELEENTIPEIQRSNLGNVVLLLKSLGINDLIHFDFMDPPPAETFIIALEQLYALGGL
NHHGELTKLGRRMAEFSVSKEPKIDFHFQLSFRYKCVEQILTITAMLSVNNAIFYRPKDK
VVHADNARVNFFRPGGDHLTLLNVYDQWVETGYLTQWCYENFIQHRSMKRARDVREQLEG
LMERVEIEISSNPNDSVPIRKAITSGYFYHTARLGKSGQYRTVKHQQTVMIHPNSSLFQD
QPRWVIYHELVFTTKEFTRQIIEIENKWLLEVAPHYYKAKELEDSSSKKMPKTAGVTREQ
ARSTT
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaccaagcttttgaggaggcagccaaaagacttaaaatggatgaggaggat
agaaagaaaatggttcctgatttaaggaaaaagtctcgccgagattatgtcaaaaaacgg
cgggtggacaagcttgaaatgcttaaagaggacattcttgatgatgaatacttgtttgaa
gatgctcagatttcaaaaagagagaaacaggatcaagaatataagaaaaaggtttaccat
ttagcagtagagcatgccaaggctggagaattggaaaaagtacagagatatgaaatgcca
caggaaaatcagaagcctgccagatatgatgaaaccacagtggaagaactgggacctaat
tatgagcagaagaaatgggaggaggacaagcttggttatgctgtcatgaaatttattgcc
aaagatgcatgggacaagaacaagaataaggattatgatcttgttgtggatgaagatcag
attaattttgtaatggctgaacagattcctgggataaaagagaggcaggaaccagaaatg
aatgactatcagaagaaaagattaacaattgaagaggtggcaaaaagtttgtcaatannn
ccatatagagagagccttatccaagccatcagagatcatcaggttattattatcgaagga
gagacaggctcaggaaagaccactcaaattccacaataccttcatgaagcaggttttacc
aagggtaagatgaaaattgggtgtactcagcctcgacgagttgcagcaatgagcgtcgca
gcaagagtatctgaagagatgggtacaaaactaggaaatgaggttggatacagtatccgt
ttcgaagattgctgttcagagcgaaccataataaagtacatgactgatggaatgttgctg
cgtgagttcttgggtgaaccggatctagctggatacagtgttctgattattgacgaagct
cacgaacgaacccttcatactgatgtgctatttggcttggtcaaggacattgctcgattc
cgaaaagatcttaaacttctgatatccagtgcgactttggatgctgacaagttttcacag
ttctttgaggatgcgcccatctttagaattcctggtcgaagatttcccgtgaatatttat
tacacaaagtctccagaagctgattatcttgaagccacggtggtgactgtgttacagata
cacgtgacccaacccccaggggacatcctggttttttttactggctaggaggaaatcgaa
aggtcacaggagttgttacaagaacgcacgcgccaactgggctccaaaatcaatgagcta
accattcttcccatctactctaatcttccatcggatttgcaagcgaagatatttgagccc
actcctcctgggggaagaaaagttgttttagccaccaatatcgccgagacgtcgctaacc
attgatggtattatatatgttattgatcctggattttgtaaacagaagagttacaaccca
cgcacaggaatggagtcactagtggtgacacccatttcaaaagcatcagccaatcaaaga
gcaggtcgtgcgggtcgcgtggcagcaggcaactgtttcagattgtacacagcatgggcg
tacaagaacgaactggaggagaacaccatccccgagatccagagaagtaacttgggaaat
gtagttctacttctgaagagcctgggtatcaacgatttgattcattttgatttcatggat
ccccctccggctgagacctttatcattgccctcgagcagctgtacgctctgggaggactg
aaccatcacggagaactcacaaagcttggacgtcgcatggcggaattttctgtgtcaaaa
gaacccaagatcgattttcattttcaattgtctttcaggtacaagtgcgtcgaacagatt
cttaccatcactgccatgttatcggtgaacaacgccattttctatcgccccaaggataaa
gtcgtacatgcggacaacgcgcgcgtaaacttctttcgtccaggaggtgatcacctgaca
ttgttgaacgtgtacgatcagtgggtggagactgggtacctcactcaatggtgctatgag
aatttcatacagcatcgctctatgaagagagcgcgtgacgttagggaacagctagaggga
ctgatggagagagtagagattgaaatttcgtcgaacccaaatgattctgttcctatcaga
aaggcgatcacatcaggttacttttatcacactgccaggctaggcaagagtggccagtac
aggacagtaaaacatcagcagacagtcatgattcacccgaacagcagtcttttccaggac
cagcccagatgggtgatctaccacgagcttgtgttcactacaaaggagttcacgagacag
atcatagagattgaaaacaaatggctgttggaggtagcacctcactattacaaagccaag
gagctagaagacagctccagtaagaaaatgcccaagacggctggagtcacaagagagcaa
gctaggtcgacgacgtga
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