Stylophora pistillata (Smooth Cauliflower Coral): 111340468
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Entry
111340468 CDS
T05774
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111340468
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111340468
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111340468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
SWI2_SNF2
PhoH
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
111340468
NCBI-ProteinID:
XP_022803052
EnsemblRapid:
LOC111340468
LinkDB
All DBs
Position
Unknown
AA seq
1865 aa
AA seq
DB search
MAEGGEDYYSTSDLDSDVPVVDSSDGENDSDDVTEDCSEDDDVEHLSGSEEEEEDEEEFQ
LEDEEEEQIDDDEERQFVKEPDQLNKGGTPEESRKDGFDKDDKPPKPPPNFSNSMRLVRK
RFYGQLVDTKFVNVLTDFADAEIFLIDGDSLLLEILGEKSLDWNSGGQFLHLTYLTERFL
QTFTEKGGAFHIVFLKEMEIIWRSNPSMLLAREALILHLQNNTDFTVKTLIVNFWGKEWK
DYVNEEVPAFLLLADAENIPYQHGKLKETIEYFFRCLLCHCLAHGLNCVFISGIQTTATK
VMGFYSYSSAIHKKYFTKFEQPIWRTWQFLVNFWQDEADKCGPRWSETFPRDTKAEYVDI
PQIAVEAEVRKALQPPPQGGCRQVSTVVACALILSKALKDPSTTKKTMKTAEDKMKLFLL
HTVLLNKLPLKCRAHLIDENLLNEFCKAKDGNLYPFNEIHVCLWEILKTIQVVQGNQRRD
ETGNDFFKSVADLMDGRLIHTLFCAVLEQRLKGIEGLNLPEDVIEEVEDAWIKVVDVVNK
SCSSHSPDAQFFPFIEDVADFHAADAVSVVRSDADSTMKLRRLTEVQSDLVNSYAGDIRS
EINVMAEEMIMSDDEISNVGQEFDELYHWHSLKPLSDDYDRTKKSITDNPPNNPWLRKRY
YKDKQKFVRFQRFYGNSLVGGSDQQKIITVTKSGSKKKTGKRKERKQSKKAAAIIEERLD
ETSKKARLKDQEKWDVIVRDIETNLRRDNFSDVLKLIDKYLIVCKSSELRLRALMKKVDS
CFEAWKQIRTANPGSNEMKYPVLLMESVHKICQDLSSVMRDKNKKKLAKTMQKLGFDDLV
PLFYEMLPDREAKTAQLSVHTTSSRFQLEYMGHLLKREERTDPDSRVENFIPDTWQRELL
DAVDNNESAVIVAPTSSGKTYASYYCMEKVLRQDNDSVVVYVAPTKALVNQVVATIYAQF
EKQMPKGRSVYGIFTRDYRQNTLNSQILVTVPQCLEILFISPHRQHWTKNVKYVIFDEVH
CIGSETGAEVWEHLLLMIRCPFLALSATIGNPEDLRRWLQAAQDFREKQDRENNEDLRKS
YRIRLVKFEERYSDLEKSIYLPNPKEKQGSDVNSDKEFVRLHPCAQLGYKQLLENGFPGD
MALTPKESLQLYDTMVSVWRDCESLQNLRPETYFLEMKLIRKGHARQYESDLKREFKSWA
DSKQLTKVQSVINSLNSVFVETHSSTEEQWSKLRMTSFGKSFIKKTFEKLIDQLRAQDKL
PALVFSDDRKLCEHLALGYAEKLEKREQIMRRKASTREAMNAQKRQGKAEKKLHRKRDEL
QKEREKRVNSQPDDQDERGSISASNEVLPECTLAFTFGIGKEDYDEIMRRIWFIPDKSLF
KHALKRGISFHHSGCNAKKRSVVEMLFRCKYLQVVNSTSTLALGIHMPCKTVVFAGDSPF
LNSLQYRQMSGRAGRRGFDPVGNVIFFGIPYRKVQRLMTANIPKLVGNFPITVSLVLRLL
LMTTQADDRGDALTKALALLSHPFICRKYPRMETQIKLHFLFSVELLTRLSLVNRETGAP
QEMAGLATHLHYHEPSNYVLVSFLQCGLFHKLCKPGTNGKFSENVMRKMVLVLSHLIGRT
YLHPSLMLRTPSSSKVFLEDLPSEFAKAVKSYNRQVTDVFSQYLATVAKWLEKDRGEDNK
LPLSGIEFPKKASIDEIDEQDMVKVLANSSIQYSACSSFAALSGNTDFQLHPLSRQKTDG
QREDEANSDEEEGEEEPLKYLLKIIRQDVYTDMNLVPILPVRNAQPLNAYALDFFKHGSS
KVIENENGMQAGDVYNALKEINLTIKSISCSLEQLGPETDNVVLAFKQLAQEYGEKFREE
FEYEA
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggaggcgaagattattattcaacatccgatttggactcggatgttcctgtg
gttgactccagtgatggcgaaaatgacagcgacgatgtcactgaggattgtagtgaggat
gacgatgttgagcacctttctggcagtgaagaagaagaagaagacgaagaagaattccaa
ttggaagatgaggaggaagagcaaattgacgacgacgaggaaagacaatttgttaaagag
ccagatcagctaaataaaggtggaactccagaagaatcgcgcaaggatggttttgacaag
gatgacaaacctcctaaacctccacccaacttctccaatagtatgcgtttggttagaaag
agattttatggccaactagtggacacaaaatttgttaacgtcctgacagattttgcagac
gcggagattttccttatagatggcgattccttgctgttagagattcttggtgagaaaagc
ttggactggaatagcggtggacagtttttgcaccttacatacttgacagagcgatttttg
caaaccttcacagaaaaaggtggcgctttccacatcgtgtttcttaaagaaatggagatc
atctggagaagtaatccgtccatgctgctcgctcgagaagctcttattcttcacctccag
aacaacacagattttactgtgaaaactttaatagtgaatttctggggaaaggagtggaaa
gattacgttaatgaggaggtccctgcgtttttgctgttagcagatgctgaaaacattcct
taccagcatggaaagctaaaagaaacaatagaatattttttccgatgtctgttgtgtcat
tgtcttgcacatggactgaattgtgtgtttatctcgggcatccagacaactgcgaccaaa
gtgatgggattttacagctattcctcagctattcacaaaaagtattttacgaagtttgaa
caaccaatatggaggacatggcaatttctggtgaatttctggcaagatgaggcagataaa
tgcggtcccagatggtcggaaacatttcctcgagatactaaggcggaatatgtggacata
cctcagattgctgtagaagcagaagtgcgcaaagctcttcagcctccaccacaaggcggc
tgccggcaggtttccacagttgttgcgtgtgcgctgatcctatctaaagctctcaaggac
cctagcactacaaagaaaacgatgaaaactgcagaggacaagatgaagcttttcttgctt
cacactgtattactgaacaaactgccgttgaagtgtagagctcacctcatagacgaaaac
ttgctgaatgaattctgtaaagcaaaggatggcaacctctatccctttaacgagatccac
gtgtgtttatgggagattttaaaaactatacaagttgtgcagggaaatcaaagaagagac
gaaacgggcaatgactttttcaagtcagtggccgatttgatggatggacgtctgatccat
actctcttttgcgctgtcttggagcaaaggttaaaaggcattgaaggactcaatcttccg
gaggatgtcatcgaggaagtagaagatgcatggataaaagttgtagatgttgtaaacaag
tcatgcagttctcattcccctgatgctcagttttttccctttatcgaggatgtggcagat
tttcatgcagcagatgcagtttcagtggtgcgttctgatgcagactccaccatgaagctg
aggcgccttactgaagtgcaaagtgatcttgtgaattcttatgctggggacatccgatca
gaaattaacgtcatggcagaagaaatgatcatgagtgacgacgagatatctaatgttggt
caagaatttgatgaactataccactggcattctcttaagcctctttctgatgattatgac
agaacaaagaaatctattactgataatcctccaaacaatccttggctaaggaaacggtat
tataaggataagcaaaaatttgtccgttttcaaagattctacggtaactcactggttggt
ggcagtgatcaacaaaaaatcatcactgtcacaaagtcaggatcaaagaagaaaacagga
aaaagaaaggaaagaaaacagagcaaaaaggctgcagcaattatcgaggaacgtcttgac
gaaacttcgaagaaagcgagattgaaagatcaagaaaaatgggatgtcattgtaagggac
atcgaaacaaatctgaggagagataacttcagcgatgttctcaaattgattgataaatat
ctaatagtttgcaaatcttcagaacttcgtcttcgcgcgctcatgaaaaaagtcgacagt
tgctttgaagcctggaaacagataagaactgctaacccaggatctaatgaaatgaaatac
cctgtacttttgatggaaagcgttcacaaaatatgtcaagacttgtcgagtgttatgaga
gataagaacaagaagaaacttgctaaaactatgcaaaagctggggtttgacgacctcgtg
cccttgttttatgagatgctaccagatcgtgaggcaaagactgcacagctttctgttcac
accacaagctcaagattccaacttgaatacatggggcatttgctgaaacgggaagagaga
accgatccggactctcgggttgaaaattttattccggatacatggcagcgcgagcttctc
gatgctgttgataacaatgagtcagcggtgatagtggcaccaacttcgtcagggaagact
tacgcctcgtactactgcatggagaaagttttgaggcaagacaatgacagtgtagtggtc
tatgttgcaccgacaaaggcattggtcaatcaagttgttgccacaatttatgcacagttt
gaaaaacagatgcctaaaggaagatcagtgtacggtattttcacaagagactatcgtcaa
aacacactaaattcccagattcttgtaacagtcccccagtgtttggagatcctcttcatt
tctccacacagacagcattggactaagaatgtcaaatacgtgatatttgatgaggttcat
tgcattggttcagaaactggagctgaagtgtgggagcatctccttcttatgattcgctgt
ccctttctggcgctctcggcaaccattggaaatccagaggacctaagacgctggctgcaa
gcagcccaagactttcgtgaaaagcaggacagagaaaacaatgaagatctaaggaagtca
tatcggatcaggttagttaaatttgaagaacgatactccgatctggaaaagagcatttac
cttccaaatcctaaggaaaagcaaggaagtgatgtcaacagcgacaaggaattcgtaaga
cttcatccatgtgcccagctaggatacaaacagcttctagagaatggttttccaggtgat
atggcacttacaccaaaagaatctttgcagttgtatgacactatggttagtgtgtggcga
gactgtgaatcactccagaatcttcgtcctgagacatacttcctggaaatgaaattgatc
cgaaagggtcatgctcgacaatacgagagtgatctgaagagggaattcaagtcctgggca
gacagcaaacagttgacaaaggttcagtcagttattaattctttgaactcagtttttgtg
gaaactcattcttcaactgaagaacaatggagtaaactgagaatgacatcgtttggtaaa
agtttcataaagaaaacttttgaaaaacttattgaccagctcagagcccaggacaaactg
cctgccttggtgtttagtgatgatcgtaaactttgcgaacatttggcactcggttatgct
gagaaactagaaaagagggaacaaattatgcgaagaaaggccagcacaagagaagcaatg
aatgcacaaaagagacaaggaaaagctgaaaaaaagttgcacagaaaaagagatgaatta
cagaaagagagagagaaaagagtaaacagccaaccggatgaccaagatgagaggggttct
atttcagcctcgaacgaagttctgccagagtgcacattggcattcacatttgggattgga
aaagaggattacgacgagataatgagaagaatctggttcatacctgacaaatcgttattc
aagcacgctcttaaacgaggaatcagctttcatcatagtggatgtaacgccaaaaagcgc
tccgtcgtcgagatgttgtttagatgcaaatatctgcaggtggttaattcaacatcaacg
ttggctcttggtattcacatgccttgcaagacagtcgtgtttgctggagactcgcccttc
ttaaattcgctgcagtaccgacagatgtctggaagggcgggtcggagaggttttgacccc
gtgggaaatgtcattttctttggaattccttaccgtaaagtccaacgcctcatgactgca
aacatcccgaagcttgtgggcaacttccccattactgtatcactggtactgcggctgctt
ctgatgacgacccaagcagatgacaggggagatgccctcaccaaggccctagcattgctc
tctcatccttttatttgccgaaagtacccgcgaatggaaacccagatcaagctacatttc
ctcttcagcgttgaacttctgactagactgtctctcgtaaacagagaaaccggagctcca
caagaaatggccggactggcgacccatcttcattaccatgaaccttccaattatgtcctg
gtcagttttctacaatgtggtctcttccacaagttgtgtaagccaggaacaaacggtaaa
ttttctgaaaatgtcatgaggaaaatggtgcttgttctcagccacctaattggaaggact
tatcttcatccctctctcatgctaaggactccatcttcttcaaaagtatttttggaggat
ctcccgagcgaatttgccaaggcagtcaaaagctacaaccgtcaggtcacagatgtgttt
agtcagtaccttgccacagtggctaagtggctggaaaaggacagaggagaggataacaaa
ctccccttatcaggaatagaatttccaaagaaagctagcattgatgaaattgacgagcag
gatatggtcaaagtccttgcgaactcttctatacagtattcggcttgttcctcctttgct
gcgctatcaggaaacacagacttccagttacatcctttaagccgccaaaaaacagatggc
caaagagaggatgaggctaacagtgacgaggaagaaggggaggaagagccgcttaaatat
ctgctcaagatcattcgtcaagatgtctacacggacatgaatctcgttcccattcttcca
gttaggaatgcccaacctctgaatgcttatgctttggattttttcaagcatggatcttcc
aaagtcattgagaatgaaaacggaatgcaagctggcgatgtttacaatgccctcaaggag
attaacctaactattaagtcaatcagttgttcactggaacagctgggtcctgaaactgac
aacgtggtgttggcttttaagcagctggctcaggagtacggagagaagttcagagaggag
tttgaatatgaggcatag
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integrated database retrieval system
