Sphingomonas sp. KC8: KC8_01490
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Entry
KC8_01490 CDS
T04987
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spkc03021
]
KC8_01490
Transcription machinery [BR:
spkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KC8_01490
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Caudo_TAP
Motif
Other DBs
NCBI-ProteinID:
ARS25969
UniProt:
A0A1X9YAW8
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Position
complement(299973..300959)
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AA seq
328 aa
AA seq
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MNDFKRARTDSAPLAVHAGPGSEVKIMASGKNVPATIPALGGEAGLNRYLAEIRKFPLLA
PEEEYMLAKRYQEHGDPEAATRLVTSHLRLVAKIAMGYRGYGLPTAELISEGNIGLMQGV
KKFEPDRGFRLATYAMWWIRASIQEYILRSWSLVKMGTTAAQKKLFFNLRRMKSKLDAFE
DGDLKPEDLAKIATDLGVTQEEVTSMNRRMAMGGDTSLNVSMREDGDGQWQDWLVDTDPL
QDERIADAEEQSVRHNMLVEAMTALNDREKHILAERRLSDDPKTLEELSQVYGVSRERVR
QIEVRAFDKLQKAMMRIAGEKRLLPALG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcaaacgggcacgaacagattcggcccctctagcggtccacgctggacca
gggagtgaagtgaagatcatggcaagcggcaagaacgtcccagcgacgattcccgctctc
ggcggcgaggcaggcctcaaccgctatctcgccgagatccggaagtttcccctcctcgcc
cccgaggaggaatatatgctcgcgaaacgctatcaggagcatggcgatcccgaagccgcg
acgcggctggtgacgtcccacctgcgcctcgtggcgaagattgcgatgggctatcgcggc
tacggcctgccgacggcggaactgatttccgaaggcaatatcggcctgatgcagggcgtg
aagaagttcgaaccggaccggggattccgcctcgccacctatgcgatgtggtggatccgc
gcgtcgatccaggaatatatcctgcgatcgtggagcctggtgaaaatgggcaccaccgcg
gcacagaagaagctgttcttcaacctgcggcggatgaaatccaagctcgacgcgttcgag
gacggcgatctgaagcccgaggatctggccaagatcgcgaccgacctcggcgtcacccag
gaagaggtgacgagcatgaaccgccgcatggcgatgggcggggatacctcgctcaacgta
tcgatgcgcgaggatggcgacgggcaatggcaggactggctggtcgataccgatccgctg
caggatgaacgcatcgccgacgccgaggaacagagcgtacgccacaacatgctggtcgaa
gcgatgaccgcgctcaacgatcgcgaaaagcacatcctcgccgaacgccgcctgtcggac
gatcccaagacgcttgaggaactgagccaggtctacggcgtcagccgcgaacgcgtccgc
cagatcgaagtccgcgcgttcgacaagctgcaaaaagcgatgatgcggattgcgggcgaa
aaaaggctgctgcccgcactgggctga
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